RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OATP04181 439 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 DDIT3P35638 169 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 IGBP1P78318 339 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 ZNF200P98182 395 aaPredicted RBP17.38■□□□□ 0.37
DDB1-218ENST00000540784 CYP4A11Q02928 519 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 CTTNQ14247 550 aaKnown RBP17.38■□□□□ 0.37
DDB1-218ENST00000540784 SLC39A14Q15043 492 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 STK38Q15208 465 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 PTPAQ15257 358 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 GRIK4Q16099 956 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 ZNF484Q5JVG2 852 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 PRDM5Q9NQX1 630 aaPredicted RBP17.38■□□□□ 0.37
DDB1-218ENST00000540784 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
DDB1-218ENST00000540784 MARCKSP29966 332 aaPredicted RBP17.37■□□□□ 0.37
DDB1-218ENST00000540784 NASPP49321 788 aaPredicted RBP17.37■□□□□ 0.37
DDB1-218ENST00000540784 PRKCEQ02156 737 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 HIC1Q14526 733 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 OTUD6AQ7L8S5 288 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 LXNQ9BS40 222 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
DDB1-218ENST00000540784 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
DDB1-218ENST00000540784 TUFT1Q9NNX1 390 aa17.37■□□□□ 0.37
DDB1-218ENST00000540784 TREHO43280 583 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 STBD1O95210 358 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 CYP2C9P11712 490 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 RPA1P27694 616 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 HOXC8P31273 242 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
DDB1-218ENST00000540784 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
DDB1-218ENST00000540784 PTK7Q13308 1070 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 SH3RF1Q7Z6J0 888 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 CATSPER3Q86XQ3 398 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 LINC00301Q8NCQ3 95 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 AK8Q96MA6 479 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
DDB1-218ENST00000540784 SRPRBQ9Y5M8 271 aaKnown RBP17.36■□□□□ 0.37
DDB1-218ENST00000540784 SCN10AQ9Y5Y9 1956 aa17.36■□□□□ 0.37
DDB1-218ENST00000540784 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 KIAA0355O15063 1070 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 YEATS4O95619 227 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 SPATA31C1P0DKV0 1188 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDB1-218ENST00000540784 KLRC1P26715 233 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 ADAM17P78536 824 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 HAUS3Q68CZ6 603 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 TRAPPC12Q8WVT3 735 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 MORC2Q9Y6X9 1032 aaPredicted RBP17.35■□□□□ 0.37
DDB1-218ENST00000540784 COL1A2P08123 1366 aa17.35■□□□□ 0.37
DDB1-218ENST00000540784 PP2D1A8MPX8 630 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 SPTLC2O15270 562 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 MED24O75448 989 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 LYPLA2O95372 231 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 RAG1P15918 1043 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 MUTP22033 750 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 CDC25AP30304 524 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 YWHABP31946 246 aaKnown RBP17.34■□□□□ 0.37
DDB1-218ENST00000540784 BFSP2Q13515 415 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 MTHFD1LQ6UB35 978 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 ANO5Q75V66 913 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 SERINC5Q86VE9 423 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 CCDC155Q8N6L0 562 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
DDB1-218ENST00000540784 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 SNX29Q8TEQ0 813 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 NACC1Q96RE7 527 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 CTAGE1Q96RT6 745 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
DDB1-218ENST00000540784 TBX21Q9UL17 535 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 ZMYND8Q9ULU4 1186 aaPredicted RBP17.34■□□□□ 0.37
DDB1-218ENST00000540784 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
DDB1-218ENST00000540784 A0A087WWV3 80 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 MBLAC1A4D2B0 266 aaPredicted RBP17.33■□□□□ 0.36
DDB1-218ENST00000540784 ZBTB42B2RXF5 422 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 ZBTB39O15060 712 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 MAGEB2O15479 319 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 PPP6R2O75170 966 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 TIMP1P01033 207 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 SYN1P17600 705 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
DDB1-218ENST00000540784 UBA7P41226 1012 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 KRT85P78386 507 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 TARBP2Q15633 366 aaKnown RBP17.33■□□□□ 0.36
DDB1-218ENST00000540784 MTERF2Q49AM1 385 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 ANKEF1Q9NU02 776 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms