RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SUDS3Q9H7L9 328 aaPredicted RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 HOMER3Q9NSC5 361 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 CACNA1SQ13698 1873 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 SMIM23A6NLE4 172 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 C19orf81C9J6K1 198 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 GRK4P32298 578 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 GBP1P32455 592 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ADD2P35612 726 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 KRT2P35908 639 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 MAGEA1P43355 309 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 SCTRP47872 440 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ERVK-24P63145 666 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 CCDC38Q502W7 563 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
DDB1-217ENST00000540166 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 STAMBPL1Q96FJ0 436 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 SEC16BQ96JE7 1060 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 SH3GL2Q99962 352 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
DDB1-217ENST00000540166 ESYT3A0FGR9 886 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 ZBED4O75132 1171 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 MMP1P03956 469 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 CYP2C8P10632 490 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 PTPREP23469 700 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 MCAMP43121 646 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 FNTAP49354 379 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 KCTD2Q14681 263 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 CCDC6Q16204 474 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 ZNF483Q8TF39 744 aaPredicted RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 EPSTI1Q96J88 318 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 NOX5Q96PH1 765 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 HSD3B7Q9H2F3 369 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 AGPSO00116 658 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 ADCY3O60266 1144 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 MCM7P33993 719 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 POLE2P56282 527 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 ICA1Q05084 483 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 GRIN1Q05586 938 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 TSNAXIP1Q2TAA8 658 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 WLSQ5T9L3 541 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 PPP4R3AQ6IN85 833 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 ESR2Q92731 530 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 GSDMAQ96QA5 445 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.47□□□□□ -0.89
DDB1-217ENST00000540166 PDE4DIPQ5VU43 2346 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 BTBD19C9JJ37 291 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 HGSO14964 777 aaPredicted RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 PRDM1O75626 825 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 MTMR2Q13614 643 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 PTPAQ15257 358 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 IFIT1BQ5T764 474 aaKnown RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 USP49Q70CQ1 688 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 GPRC5AQ8NFJ5 357 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 WHAMMQ8TF30 809 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 KLHL29Q96CT2 875 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 CCDC17Q96LX7 622 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 KRT12Q99456 494 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 PYM1Q9BRP8 204 aaKnown RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 MMRN2Q9H8L6 949 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
DDB1-217ENST00000540166 HPSEQ9Y251 543 aa9.47□□□□□ -0.89
DDB1-217ENST00000540166 BMP15O95972 392 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 PECAM1P16284 738 aaPredicted RBP9.46□□□□□ -0.89
DDB1-217ENST00000540166 IFNAR1P17181 557 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 GNAT2P19087 354 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 TM4SF4P48230 202 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 TTMPQ5BVD1 217 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 LDLRAD1Q5T700 205 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.46□□□□□ -0.89
DDB1-217ENST00000540166 FANCBQ8NB91 859 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 AENQ8WTP8 325 aaKnown RBP9.46□□□□□ -0.89
DDB1-217ENST00000540166 RUBCNQ92622 972 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 PLIN2Q99541 437 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.89
DDB1-217ENST00000540166 LRWD1Q9UFC0 647 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 TFR2Q9UP52 801 aa9.46□□□□□ -0.89
DDB1-217ENST00000540166 TTC26A0AVF1 554 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 RASSF9O75901 435 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 ATP6V1G2O95670 118 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 ABL1P00519 1130 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 GUCY1A2P33402 732 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 MTMR3Q13615 1198 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 PAPD7Q5XG87 772 aaKnown RBP9.46□□□□□ -0.9
DDB1-217ENST00000540166 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 ZNF654Q8IZM8 581 aa9.46□□□□□ -0.9
DDB1-217ENST00000540166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
DDB1-217ENST00000540166 GTF3C2Q8WUA4 911 aaPredicted RBP9.46□□□□□ -0.9
DDB1-217ENST00000540166 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
DDB1-217ENST00000540166 NSUN4Q96CB9 384 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms