RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 C1orf186Q6ZWK4 172 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 C4orf19Q8IY42 314 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 MYOCDQ8IZQ8 938 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 RUSC1Q9BVN2 902 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 JPH1Q9HDC5 661 aaPredicted RBP18.72■□□□□ 0.59
COPS3-212ENST00000539941 PCDHA2Q9Y5H9 948 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 PCDHA10Q9Y5I2 948 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
COPS3-212ENST00000539941 LRRC37A2A6NM11 1700 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 NPHP3-ACAD11A0A0J9YXS1 232 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 A0A1B0GTH6 734 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 LRRC10BA6NIK2 292 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 TBCAO75347 108 aaKnown RBP18.71■□□□□ 0.59
COPS3-212ENST00000539941 LRRC63Q05C16 580 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 HPS3Q969F9 1004 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 SLC9A2Q9UBY0 812 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 LIMA1Q9UHB6 759 aaKnown RBP18.71■□□□□ 0.59
COPS3-212ENST00000539941 ODF2LQ9ULJ1 636 aa18.71■□□□□ 0.59
COPS3-212ENST00000539941 ARHGEF35A5YM69 484 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 TRIM49BA6NDI0 452 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 TGFB3P10600 412 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 GUCY2CP25092 1073 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 EEF1GP26641 437 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 CTCFP49711 727 aaPredicted RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 PMS1P54277 932 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 GSDMDP57764 484 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 MKRN3Q13064 507 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 APTXQ7Z2E3 356 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 IPO4Q8TEX9 1081 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 ZIC5Q96T25 663 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 ZCCHC17Q9NP64 241 aaKnown RBP18.7■□□□□ 0.58
COPS3-212ENST00000539941 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
COPS3-212ENST00000539941 FILIP1LQ4L180 1135 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 HSP90AA4PQ58FG1 418 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 TCP11X2Q5H9J9 407 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 RGMBQ6NW40 437 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 CCDC186Q7Z3E2 898 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 CSGALNACT2Q8N6G5 542 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 TSG101Q99816 390 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 DUSP9Q99956 384 aaKnown RBP18.69■□□□□ 0.58
COPS3-212ENST00000539941 OLFML3Q9NRN5 406 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 ANKEF1Q9NU02 776 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 FAM155AB1AL88 458 aaPredicted RBP18.69■□□□□ 0.58
COPS3-212ENST00000539941 KCNJ18B7U540 433 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 FGFR1OPO95684 399 aaKnown RBP18.69■□□□□ 0.58
COPS3-212ENST00000539941 PSAPP07602 524 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 CACNB1Q02641 598 aaPredicted RBP18.69■□□□□ 0.58
COPS3-212ENST00000539941 RAD51AP2Q09MP3 1159 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 KCNJ12Q14500 433 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 NR1I3Q14994 352 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 ANKRD40Q6AI12 368 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 KCNV1Q6PIU1 500 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 VSTM4Q8IW00 320 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 ATP6V0A1Q93050 837 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 FGD4Q96M96 766 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 TIPINQ9BVW5 301 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 SRRTQ9BXP5 876 aaKnown RBP18.69■□□□□ 0.58
COPS3-212ENST00000539941 SEMA6BQ9H3T3 888 aa18.69■□□□□ 0.58
COPS3-212ENST00000539941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.69■□□□□ 0.58
COPS3-212ENST00000539941 ZNFX1Q9P2E3 1918 aaKnown RBP18.68■□□□□ 0.58
COPS3-212ENST00000539941 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
COPS3-212ENST00000539941 STRNO43815 780 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 FAM13AO94988 1023 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
COPS3-212ENST00000539941 PTGS1P23219 599 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 YWHABP31946 246 aaKnown RBP18.68■□□□□ 0.58
COPS3-212ENST00000539941 ZNF131P52739 623 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 LBX1P52954 281 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 WDR78Q5VTH9 848 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 TMC6Q7Z403 805 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 RASAL3Q86YV0 1011 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 PORCNQ9H237 461 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 R3HDMLQ9H3Y0 253 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 INTS13Q9NVM9 706 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 MAGEC2Q9UBF1 373 aaPredicted RBP18.68■□□□□ 0.58
COPS3-212ENST00000539941 NRBP1Q9UHY1 535 aa18.68■□□□□ 0.58
COPS3-212ENST00000539941 WDR81Q562E7 1941 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 ASB14A6NK59 587 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 ZBTB39O15060 712 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 COBLO75128 1261 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 PGK2P07205 417 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 RARRES1P49788 294 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 NEDD9Q14511 834 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 KRT31Q15323 416 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 MIS18BP1Q6P0N0 1132 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 PADI6Q6TGC4 694 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 SEPT14Q6ZU15 432 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 SFR1Q86XK3 245 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 IRF2BP1Q8IU81 584 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 PTPN18Q99952 460 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 ZHX3Q9H4I2 956 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 EFCC1Q9HA90 598 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms