RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FNDC3BQ53EP0 1204 aaKnown RBP5.17□□□□□ -1.58
USP48-215ENST00000534705 FAM47CQ5HY64 1035 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 RNF207Q6ZRF8 634 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 ARRDC4Q8NCT1 418 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 PCDH19Q8TAB3 1148 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 FBXW5Q969U6 566 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 PTPN18Q99952 460 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 PIF1Q9H611 641 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 NDOR1Q9UHB4 597 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 ZDHHC9Q9Y397 364 aa5.17□□□□□ -1.58
USP48-215ENST00000534705 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.16□□□□□ -1.58
USP48-215ENST00000534705 PPFIA2O75334 1257 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 ZNF202O95125 648 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 CRTAMO95727 393 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 STAT5AP42229 794 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 MLLT6P55198 1093 aaPredicted RBP5.16□□□□□ -1.58
USP48-215ENST00000534705 SQSTM1Q13501 440 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 GPR19Q15760 415 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 FIGNQ5HY92 759 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 C16orf59Q7L2K0 433 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 SH3TC2Q8TF17 1288 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 TMEM209Q96SK2 561 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 MEGF9Q9H1U4 602 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 DSEQ9UL01 958 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 PCDHA8Q9Y5H6 950 aa5.16□□□□□ -1.58
USP48-215ENST00000534705 SLC27A2O14975 620 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 RFPL3O75679 317 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 TUSC3Q13454 348 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 KCTD1Q719H9 257 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 BRAPQ7Z569 592 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.15□□□□□ -1.59
USP48-215ENST00000534705 NLGN4XQ8N0W4 816 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 SLC7A14Q8TBB6 771 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 MAGEB10Q96LZ2 347 aaPredicted RBP5.15□□□□□ -1.59
USP48-215ENST00000534705 KCNJ15Q99712 375 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 CELF4Q9BZC1 486 aaKnown RBP5.15□□□□□ -1.59
USP48-215ENST00000534705 TRIM8Q9BZR9 551 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 CSRNP2Q9H175 543 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 IKZF4Q9H2S9 585 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 TRIM39Q9HCM9 518 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 CROTQ9UKG9 612 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 SRPK3Q9UPE1 567 aa5.15□□□□□ -1.59
USP48-215ENST00000534705 NKRFO15226 690 aaKnown RBP eCLIP5.14□□□□□ -1.59
USP48-215ENST00000534705 LRG1P02750 347 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 GJA4P35212 333 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 INHBCP55103 352 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 NANOS3P60323 173 aaKnown RBP5.14□□□□□ -1.59
USP48-215ENST00000534705 LACTBP83111 547 aaPredicted RBP5.14□□□□□ -1.59
USP48-215ENST00000534705 ZC3H7AQ8IWR0 971 aaKnown RBP5.14□□□□□ -1.59
USP48-215ENST00000534705 DNAJC10Q8IXB1 793 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 SH3RF2Q8TEC5 729 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 SCLYQ96I15 445 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 ADOQ96SZ5 270 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 ADAM29Q9UKF5 820 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 PCDHA9Q9Y5H5 950 aa5.14□□□□□ -1.59
USP48-215ENST00000534705 CUX2O14529 1486 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 TCRBV16S1A1N1A0A5B0 115 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CCDC66A2RUB6 948 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 B4E1Z4 1266 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 ZNF561-AS1K7EIQ3 104 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 COL6A2P12110 1019 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 FAHP16930 419 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 ST5P78524 1137 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 PTH1RQ03431 593 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CRY1Q16526 586 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 PAN2Q504Q3 1202 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 TRMT10BQ6PF06 316 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 NOP9Q86U38 636 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 HOMER1Q86YM7 354 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 ZCCHC14Q8WYQ9 949 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 EDAQ92838 391 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 RNPC3Q96LT9 517 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 ZSWIM3Q96MP5 696 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CBLCQ9ULV8 474 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 ZFR2Q9UPR6 939 aaKnown RBP5.13□□□□□ -1.59
USP48-215ENST00000534705 TELO2Q9Y4R8 837 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CADPSQ9ULU8 1353 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CCDC88BA6NC98 1476 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 CFTRP13569 1480 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 ERCC6Q03468 1493 aa5.13□□□□□ -1.59
USP48-215ENST00000534705 A0A087X1B8 175 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 TCRBV5S4A2TA0A5A2 114 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 MAN2B1O00754 1011 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 NARSO43776 548 aaKnown RBP5.12□□□□□ -1.59
USP48-215ENST00000534705 RASGRP1O95267 797 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 CHGBP05060 677 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 CKMP06732 381 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 PYGMP11217 842 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 LSM12Q3MHD2 195 aaKnown RBP5.12□□□□□ -1.59
USP48-215ENST00000534705 USP39Q53GS9 565 aaKnown RBP5.12□□□□□ -1.59
USP48-215ENST00000534705 ARHGAP36Q6ZRI8 547 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 PROSER1Q86XN7 944 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 CLEC4DQ8WXI8 215 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 DLL4Q9NR61 685 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 WDR62O43379 1518 aa5.12□□□□□ -1.59
USP48-215ENST00000534705 ESYT3A0FGR9 886 aa5.11□□□□□ -1.59
USP48-215ENST00000534705 CLASP2O75122 1294 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms