RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NR3C1P04150 777 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 MYBP10242 640 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 SETQ01105 290 aaPredicted RBP18.9■□□□□ 0.62
BRCA2-204ENST00000530893 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 EXOC3L4Q17RC7 722 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 CCDC181Q5TID7 509 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 LRCH2Q5VUJ6 765 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 SPATA4Q8NEY3 305 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 TBC1D5Q92609 795 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 RUSC1Q9BVN2 902 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 WDR11Q9BZH6 1224 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 ZNF70Q9UC06 446 aaPredicted RBP18.9■□□□□ 0.62
BRCA2-204ENST00000530893 SALL4Q9UJQ4 1053 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 ADAM21Q9UKJ8 722 aa18.9■□□□□ 0.62
BRCA2-204ENST00000530893 ASTN1O14525 1302 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 UBE4BO95155 1302 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 PRPF6O94906 941 aaKnown RBP18.89■□□□□ 0.61
BRCA2-204ENST00000530893 SLITRK3O94933 977 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 GCNT3O95395 438 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 VIL1P09327 827 aaKnown RBP18.89■□□□□ 0.61
BRCA2-204ENST00000530893 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.61
BRCA2-204ENST00000530893 KLHDC7AQ5VTJ3 777 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
BRCA2-204ENST00000530893 RTKN2Q8IZC4 609 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 TLR10Q9BXR5 811 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 DEFB129Q9H1M3 183 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 VCPKMTQ9H867 229 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 LOXHD1Q8IVV2 1947 aa18.89■□□□□ 0.61
BRCA2-204ENST00000530893 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
BRCA2-204ENST00000530893 UCHL3P15374 230 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 PRELPP51888 382 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 SPDYE2Q495Y8 402 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 CEP55Q53EZ4 464 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 DPY19L2P1Q6NXN4 242 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 COG1Q8WTW3 980 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 DRC1Q96MC2 740 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 GMLQ99445 158 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 PSMD1Q99460 953 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 RGL1Q9NZL6 768 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 PCDHGC5Q9Y5F6 944 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 AKAP3O75969 853 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 FAM13AO94988 1023 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 C2orf54Q08AI8 447 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 GLE1Q53GS7 698 aaKnown RBP18.88■□□□□ 0.61
BRCA2-204ENST00000530893 GBP6Q6ZN66 633 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 STXBP4Q6ZWJ1 553 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 C1orf186Q6ZWK4 172 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 FAM133AQ8N9E0 248 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 SPAG5Q96R06 1193 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
BRCA2-204ENST00000530893 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
BRCA2-204ENST00000530893 A0A087X0T9 212 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 RSPH10B2B2RC85 870 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 PPP1R12BO60237 982 aaPredicted RBP18.87■□□□□ 0.61
BRCA2-204ENST00000530893 GAS7O60861 476 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 FAM228BP0C875 321 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 RSPH10BP0C881 870 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 PON1P27169 355 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 PRKCIP41743 596 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 NAP1L1P55209 391 aaKnown RBP18.87■□□□□ 0.61
BRCA2-204ENST00000530893 CFAP221Q4G0U5 840 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 KIAA1755Q5JYT7 1200 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 NFRKBQ6P4R8 1299 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 PARVGQ9HBI0 331 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 FEM1BQ9UK73 627 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 ODF2LQ9ULJ1 636 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 CNTNAP1P78357 1384 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 FRMPD4Q14CM0 1322 aa18.87■□□□□ 0.61
BRCA2-204ENST00000530893 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
BRCA2-204ENST00000530893 C21orf2O43822 256 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 EPHA7Q15375 998 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 KIAA0753Q2KHM9 967 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 TPH2Q8IWU9 490 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 ANKRD13CQ8N6S4 541 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 MTMR14Q8NCE2 650 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 SLC35C1Q96A29 364 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 PKNOX2Q96KN3 472 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.86■□□□□ 0.61
BRCA2-204ENST00000530893 ADAMTS1Q9UHI8 967 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 SHTN1A0MZ66 631 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 BUB1O43683 1085 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
BRCA2-204ENST00000530893 SLC9A1P19634 815 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 ZNF131P52739 623 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 CTTNQ14247 550 aaKnown RBP18.86■□□□□ 0.61
BRCA2-204ENST00000530893 IFI16Q16666 785 aaKnown RBP18.86■□□□□ 0.61
BRCA2-204ENST00000530893 NEK9Q8TD19 979 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 DYDC2Q96IM9 177 aa18.86■□□□□ 0.61
BRCA2-204ENST00000530893 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
BRCA2-204ENST00000530893 GRID2IPA4D2P6 1211 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms