RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 TRAPPC12Q8WVT3 735 aa19.03■□□□□ 0.64
SF3B2-209ENST00000530322 HAS1Q92839 578 aa19.03■□□□□ 0.64
SF3B2-209ENST00000530322 ZBTB10Q96DT7 871 aa19.03■□□□□ 0.64
SF3B2-209ENST00000530322 FTOQ9C0B1 505 aaKnown RBP eCLIP19.03■□□□□ 0.647e-6■□□□□ 10.5
SF3B2-209ENST00000530322 MTIF3Q9H2K0 278 aaKnown RBP19.03■□□□□ 0.64
SF3B2-209ENST00000530322 GABBR1Q9UBS5 961 aa19.03■□□□□ 0.64
SF3B2-209ENST00000530322 SIP14410 1827 aa19.02■□□□□ 0.64
SF3B2-209ENST00000530322 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-209ENST00000530322 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-209ENST00000530322 WNT7AO00755 349 aa19.02■□□□□ 0.64
SF3B2-209ENST00000530322 FAM26DQ5JW98 314 aa19.02■□□□□ 0.64
SF3B2-209ENST00000530322 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
SF3B2-209ENST00000530322 RDM1Q8NG50 284 aa19.02■□□□□ 0.64
SF3B2-209ENST00000530322 FOXP1Q9H334 677 aaPredicted RBP19.02■□□□□ 0.64
SF3B2-209ENST00000530322 EVPLQ92817 2033 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 GBF1Q92538 1859 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 ZBTB42B2RXF5 422 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 RBAK-RBAKDNI3L0D1 243 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 ZNF862O60290 1169 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 SLC34A2O95436 690 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 ACTN1P12814 892 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 PPP2R5CQ13362 524 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 UGCGQ16739 394 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 MIER3Q7Z3K6 550 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 CKAP2LQ8IYA6 745 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 BBXQ8WY36 941 aaPredicted RBP19.01■□□□□ 0.63
SF3B2-209ENST00000530322 VAV3Q9UKW4 847 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 PCDHA2Q9Y5H9 948 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 COL1A2P08123 1366 aa19.01■□□□□ 0.63
SF3B2-209ENST00000530322 CTSHP09668 335 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 TCTN1Q2MV58 587 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 ZNF484Q5JVG2 852 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 CNKSR3Q6P9H4 555 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 MTHFD1LQ6UB35 978 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 DNAJB3Q8WWF6 145 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 OSBPL7Q9BZF2 842 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 SLC4A7Q9Y6M7 1214 aa19■□□□□ 0.63
SF3B2-209ENST00000530322 ZBBXA8MT70 800 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 GRXCR1A8MXD5 290 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 EML1O00423 815 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 BAIAP3O94812 1187 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 CHRNA1P02708 482 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 KLRC1P26715 233 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 MGAT3Q09327 533 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 TRMT1LQ7Z2T5 733 aaKnown RBP18.99■□□□□ 0.63
SF3B2-209ENST00000530322 RSPH3Q86UC2 560 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 SLFN12Q8IYM2 578 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 FAM167AQ96KS9 214 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 KIF3AQ9Y496 699 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 PTPRSQ13332 1948 aa18.99■□□□□ 0.63
SF3B2-209ENST00000530322 LOXHD1Q8IVV2 1947 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 SMIM35A0A1B0GVV1 85 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 KIF28PB7ZC32 967 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 NEMFO60524 1076 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 BAG4O95429 457 aaKnown RBP18.98■□□□□ 0.63
SF3B2-209ENST00000530322 OATP04181 439 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 RPLP2P05387 115 aaKnown RBP18.98■□□□□ 0.63
SF3B2-209ENST00000530322 U2AF2P26368 475 aaKnown RBP eCLIP18.98■□□□□ 0.637e-9■□□□□ 10.4
SF3B2-209ENST00000530322 GJB2P29033 226 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 PRKCEQ02156 737 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 SPIRE1Q08AE8 756 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 PLEKHG4Q58EX7 1191 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 MICAL3Q7RTP6 2002 aa18.98■□□□□ 0.63
SF3B2-209ENST00000530322 MARCH6O60337 910 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 DNAJB2P25686 324 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 CUL4AQ13619 759 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 CALCRLQ16602 461 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 Q7L0L9 218 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 DEFB123Q8N688 67 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 DBF4BQ8NFT6 615 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 MTMR9Q96QG7 549 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 PBX4Q9BYU1 374 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 FAM49AQ9H0Q0 323 aaPredicted RBP18.97■□□□□ 0.63
SF3B2-209ENST00000530322 NRBP2Q9NSY0 501 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 CEP131Q9UPN4 1083 aa18.97■□□□□ 0.63
SF3B2-209ENST00000530322 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.97■□□□□ 0.63
SF3B2-209ENST00000530322 ABHD14A-ACY1A0A1B0GW23 586 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 STBD1O95210 358 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 C22orf31O95567 290 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 ATP2A2P16615 1042 aaKnown RBP18.96■□□□□ 0.63
SF3B2-209ENST00000530322 ATP2B1P20020 1258 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 PBX2P40425 430 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 MRPS6P82932 125 aaKnown RBP18.96■□□□□ 0.63
SF3B2-209ENST00000530322 GNL2Q13823 731 aaKnown RBP18.96■□□□□ 0.63
SF3B2-209ENST00000530322 IKBKEQ14164 716 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 NME8Q8N427 588 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 BANK1Q8NDB2 785 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 SMC3Q9UQE7 1217 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 CDY2AQ9Y6F7 541 aa18.96■□□□□ 0.63
SF3B2-209ENST00000530322 MCM7P33993 719 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 WDR5P61964 334 aaKnown RBP18.95■□□□□ 0.62
SF3B2-209ENST00000530322 PSMC5P62195 406 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 MKRN4PQ13434 485 aaPredicted RBP18.95■□□□□ 0.62
SF3B2-209ENST00000530322 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 IER5Q5VY09 327 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 PHOSPHO2Q8TCD6 241 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 SLC9A7Q96T83 725 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms