RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 ZBBXA8MT70 800 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 NEMFO60524 1076 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 CD2BP2O95400 341 aaKnown RBP20.73■□□□□ 0.91
SREK1-207ENST00000520058 GJB2P29033 226 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 ORC2Q13416 577 aaPredicted RBP20.73■□□□□ 0.91
SREK1-207ENST00000520058 HIC1Q14526 733 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 CALCRLQ16602 461 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 OTOP2Q7RTS6 562 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 SLC4A7Q9Y6M7 1214 aa20.73■□□□□ 0.91
SREK1-207ENST00000520058 EFCAB14O75071 495 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 BAIAP3O94812 1187 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 TRAPPC10P48553 1259 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 SMAD3P84022 425 aaKnown RBP20.72■□□□□ 0.91
SREK1-207ENST00000520058 PPP2R5CQ13362 524 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 TRIM71Q2Q1W2 868 aaKnown RBP20.72■□□□□ 0.91
SREK1-207ENST00000520058 EARS2Q5JPH6 523 aaKnown RBP20.72■□□□□ 0.91
SREK1-207ENST00000520058 IER5Q5VY09 327 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 RPAINQ86UA6 219 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 PCDHA12Q9UN75 941 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 IGSF9BQ9UPX0 1349 aa20.72■□□□□ 0.91
SREK1-207ENST00000520058 GBF1Q92538 1859 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 ATP2B1P20020 1258 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 MCTP1Q6DN14 999 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 CNKSR3Q6P9H4 555 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 TRMT1LQ7Z2T5 733 aaKnown RBP20.71■□□□□ 0.91
SREK1-207ENST00000520058 NME8Q8N427 588 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 GJA10Q969M2 543 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
SREK1-207ENST00000520058 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
SREK1-207ENST00000520058 MAGEB2O15479 319 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 OATP04181 439 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 CTSHP09668 335 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 PDCP20941 246 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 KLRC1P26715 233 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 KCNJ6P48051 423 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 IKBKEQ14164 716 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 MTHFD1LQ6UB35 978 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 DNAJB3Q8WWF6 145 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 MICAL3Q7RTP6 2002 aa20.7■□□□□ 0.9
SREK1-207ENST00000520058 SMIM35A0A1B0GVV1 85 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 CXCL10P02778 98 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 TMOD1P28289 359 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 MCM7P33993 719 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 PSMC5P62195 406 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 PRKCEQ02156 737 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 MARCH8Q5T0T0 291 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 LARP1BQ659C4 914 aaKnown RBP20.69■□□□□ 0.9
SREK1-207ENST00000520058 SEPT8Q92599 483 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 WNT8BQ93098 351 aa20.69■□□□□ 0.9
SREK1-207ENST00000520058 FAM49AQ9H0Q0 323 aaPredicted RBP20.69■□□□□ 0.9
SREK1-207ENST00000520058 ABHD14A-ACY1A0A1B0GW23 586 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 SOX1O00570 391 aaPredicted RBP20.68■□□□□ 0.9
SREK1-207ENST00000520058 P4HBP07237 508 aaKnown RBP20.68■□□□□ 0.9
SREK1-207ENST00000520058 U2AF2P26368 475 aaKnown RBP eCLIP20.68■□□□□ 0.91e-11■■□□□ 13.2
SREK1-207ENST00000520058 QARSP47897 775 aaKnown RBP20.68■□□□□ 0.9
SREK1-207ENST00000520058 EPHA7Q15375 998 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 XKR3Q5GH77 459 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 FAM26DQ5JW98 314 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 TTC38Q5R3I4 469 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 RASIP1Q5U651 963 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 NCAPH2Q6IBW4 605 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 B3GNT9Q6UX72 402 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 ZNF710Q8N1W2 664 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 HAS1Q92839 578 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 APBB2Q92870 758 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 LRCH3Q96II8 777 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 SLC9A7Q96T83 725 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 TTC12Q9H892 705 aaPredicted RBP20.68■□□□□ 0.9
SREK1-207ENST00000520058 MSRAQ9UJ68 235 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 VAV3Q9UKW4 847 aa20.68■□□□□ 0.9
SREK1-207ENST00000520058 SIP14410 1827 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
SREK1-207ENST00000520058 NBNO60934 754 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 ATP4AP20648 1035 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 TXKP42681 527 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 MRPS6P82932 125 aaKnown RBP20.67■□□□□ 0.9
SREK1-207ENST00000520058 CUL4AQ13619 759 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 RAB30Q15771 203 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 RUFY4Q6ZNE9 571 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 EXOC8Q8IYI6 725 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 METTL13Q8N6R0 699 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 PHOSPHO2Q8TCD6 241 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 TRAPPC12Q8WVT3 735 aa20.67■□□□□ 0.9
SREK1-207ENST00000520058 SEPT9Q9UHD8 586 aaPredicted RBP20.67■□□□□ 0.9
SREK1-207ENST00000520058 KIF28PB7ZC32 967 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 TBC1D8BQ0IIM8 1120 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 TMEM266Q2M3C6 531 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 RILPL1Q5EBL4 403 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 ODR4Q5SWX8 454 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 ZNF697Q5TEC3 545 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 FAM43BQ6ZT52 329 aaPredicted RBP20.66■□□□□ 0.9
SREK1-207ENST00000520058 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 USP38Q8NB14 1042 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 BANK1Q8NDB2 785 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 NEK9Q8TD19 979 aa20.66■□□□□ 0.9
SREK1-207ENST00000520058 INTS4Q96HW7 963 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms