RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TUBA3CQ13748 450 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 RASA3Q14644 834 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 SEPT2Q15019 361 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 AMOTQ4VCS5 1084 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF394Q53GI3 561 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 CT47A1Q5JQC4 288 aaPredicted RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TUBA3EQ6PEY2 450 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 MTERF4Q7Z6M4 381 aaKnown RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 RELL1Q8IUW5 271 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TEX19Q8NA77 164 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 SLC43A3Q8NBI5 491 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 SMCR8Q8TEV9 937 aaPredicted RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 ERCC4Q92889 916 aaPredicted RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 CHMP4CQ96CF2 233 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF396Q96N95 335 aaPredicted RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 OSBPL2Q9H1P3 480 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 L2HGDHQ9H9P8 463 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 GFOD1Q9NXC2 390 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 HOXC10Q9NYD6 342 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 CGNQ9P2M7 1197 aaKnown RBP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 RABL2BQ9UNT1 228 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 IL16Q14005 1332 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 ENPP3O14638 875 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 NPHP1O15259 732 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 DNAJA2O60884 412 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 CDK4P11802 303 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 TFE3P19532 575 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 L1CAMP32004 1257 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 CASP2P42575 452 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 LIG3P49916 1009 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 AMPD3Q01432 767 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 TAGLNQ01995 201 aaKnown RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC85BQ15834 202 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 SYCP2LQ5T4T6 812 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 AGBL4Q5VU57 503 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 TMC7Q7Z402 723 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 MNS1Q8NEH6 495 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC34Q96HJ3 373 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 IWS1Q96ST2 819 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 APBA2Q99767 749 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 DUSP9Q99956 384 aaKnown RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 NCAPGQ9BPX3 1015 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 LZTS2Q9BRK4 669 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 SLC12A9Q9BXP2 914 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 TEX13AQ9BXU3 409 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 DHX36Q9H2U1 1008 aaKnown RBP5.3□□□□□ -1.56
NIPBL-206ENST00000509429 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 DCAF16Q9NXF7 216 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF69Q9UC07 566 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 IP6K2Q9UHH9 426 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 HDAC9Q9UKV0 1011 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 PAXBP1Q9Y5B6 917 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 IKBKGQ9Y6K9 419 aa5.3□□□□□ -1.56
NIPBL-206ENST00000509429 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SOWAHDA6NJG2 315 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 TMEM110-MUSTN1A8MSY1 372 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SCAMP3O14828 347 aaKnown RBP5.29□□□□□ -1.56
NIPBL-206ENST00000509429 KIF3BO15066 747 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 RAPGEF3O95398 923 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 GSNP06396 782 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SETSIPP0DME0 302 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 KRT4P19013 534 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 PSMA3P25788 255 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 MAGEA8P43361 318 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 DSC3Q14574 896 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 BRD3Q15059 726 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 TAF11Q15544 211 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 CTR9Q6PD62 1173 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 ETV3LQ6ZN32 361 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 GIMAP1Q8WWP7 306 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 ATRIPQ8WXE1 791 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SYAP1Q96A49 352 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-206ENST00000509429 FRMD6Q96NE9 622 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SLX1AQ9BQ83 275 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 IER2Q9BTL4 223 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 TTPALQ9BTX7 342 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 KRTAP1-5Q9BYS1 174 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 TSPY26PQ9H489 355 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 C12orf49Q9H741 205 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 COMMD8Q9NX08 183 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 USP25Q9UHP3 1055 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 RABGAP1Q9Y3P9 1069 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 KNSTRNQ9Y448 316 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 SMARCA2P51531 1590 aa5.29□□□□□ -1.56
NIPBL-206ENST00000509429 FGF10O15520 208 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-206ENST00000509429 HTR3BO95264 441 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 SRGNP10124 158 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 COMTP21964 271 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 IL13P35225 146 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 ZBED6P86452 979 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 TRIM29Q14134 588 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 DDB1Q16531 1140 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 INO80DQ53TQ3 878 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms