RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TOPORSQ9NS56 1045 aaPredicted RBP7.99□□□□□ -1.13
HERC4-213ENST00000506515 ARHGAP28Q9P2N2 729 aa7.99□□□□□ -1.13
HERC4-213ENST00000506515 MSRAQ9UJ68 235 aa7.99□□□□□ -1.13
HERC4-213ENST00000506515 NCAM1P13591 858 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 AOAHP28039 575 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 MC4RP32245 332 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 ERVK-21P61565 698 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 TTF1Q15361 905 aaPredicted RBP7.98□□□□□ -1.13
HERC4-213ENST00000506515 EPHA7Q15375 998 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 ABCB5Q2M3G0 1257 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 ZC3H18Q86VM9 953 aaKnown RBP7.98□□□□□ -1.13
HERC4-213ENST00000506515 EPB41L4BQ9H329 900 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 SLC39A2Q9NP94 309 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 UCKL1Q9NWZ5 548 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.98□□□□□ -1.13
HERC4-213ENST00000506515 THRAP3Q9Y2W1 955 aaKnown RBP7.98□□□□□ -1.13
HERC4-213ENST00000506515 WASHC2AQ641Q2 1341 aa7.98□□□□□ -1.13
HERC4-213ENST00000506515 MYOCOSA0A1B0GUC4 107 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 GOLGA8AA7E2F4 631 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 GOLGA8BA8MQT2 603 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 MT-CO1P00395 513 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 MYBL2P10244 700 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 IARSP41252 1262 aaKnown RBP7.97□□□□□ -1.13
HERC4-213ENST00000506515 MLANAQ16655 118 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 TMC5Q6UXY8 1006 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 FRMD7Q6ZUT3 714 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 LDHDQ86WU2 507 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 NME9Q86XW9 330 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 CILP2Q8IUL8 1156 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
HERC4-213ENST00000506515 ZNF496Q96IT1 587 aaPredicted RBP7.97□□□□□ -1.13
HERC4-213ENST00000506515 MENTQ9BUN1 341 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 BTBD7Q9P203 1132 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 ASB1Q9Y576 335 aa7.97□□□□□ -1.13
HERC4-213ENST00000506515 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
HERC4-213ENST00000506515 UBA6A0AVT1 1052 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 GOLGA6L22H0YM25 854 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 K7ESF4 209 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 MARCH6O60337 910 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 FBXO21O94952 628 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 APOL3O95236 402 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 C8BP07358 591 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 ENO2P09104 434 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 FBLN1P23142 703 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 NEK2P51955 445 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 CACNB2Q08289 660 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 ADCY1Q08828 1119 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 KLF1Q13351 362 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 PDCD1Q15116 288 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 VASNQ6EMK4 673 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 C7orf31Q8N865 590 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 FOXRED1Q96CU9 486 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 TUBGCP5Q96RT8 1024 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 SYT3Q9BQG1 590 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 SGPP1Q9BX95 441 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 SEMA4AQ9H3S1 761 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 POFUT1Q9H488 388 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 NGRNQ9NPE2 291 aaKnown RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.14
HERC4-213ENST00000506515 TNKSO95271 1327 aa7.96□□□□□ -1.14
HERC4-213ENST00000506515 ZCCHC6Q5VYS8 1495 aaKnown RBP7.95□□□□□ -1.14
HERC4-213ENST00000506515 LRRC10BA6NIK2 292 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 PEX10O60683 326 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 ATF2P15336 505 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 PTGS1P23219 599 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 CDR1P51861 262 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 PFKPQ01813 784 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 TARBP2Q15633 366 aaKnown RBP7.95□□□□□ -1.14
HERC4-213ENST00000506515 PTPN21Q16825 1174 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 RGL3Q3MIN7 710 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 LIPIQ6XZB0 460 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 ZBTB46Q86UZ6 589 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 PHYKPLQ8IUZ5 450 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 CBARPQ8N350 705 aaPredicted RBP7.95□□□□□ -1.14
HERC4-213ENST00000506515 SMARCC2Q8TAQ2 1214 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 CPA5Q8WXQ8 436 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 RNF38Q9H0F5 515 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 FAM53CQ9NYF3 392 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 HSPBP1Q9NZL4 362 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 WASF3Q9UPY6 502 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 FAN1Q9Y2M0 1017 aa7.95□□□□□ -1.14
HERC4-213ENST00000506515 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
HERC4-213ENST00000506515 ZNF839A8K0R7 811 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 PARNO95453 639 aaKnown RBP7.94□□□□□ -1.14
HERC4-213ENST00000506515 CYP2C8P10632 490 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 PFKLP17858 780 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 THBS2P35442 1172 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 SLC6A3Q01959 620 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 MCL1Q07820 350 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 TTC38Q5R3I4 469 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 PRAMEF9Q5VWM5 478 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 PGM2L1Q6PCE3 622 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 STK32CQ86UX6 486 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 TGFBRAP1Q8WUH2 860 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 E2F7Q96AV8 911 aa7.94□□□□□ -1.14
HERC4-213ENST00000506515 ANO3Q9BYT9 981 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms