RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TANC1Q9C0D5 1861 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 TUBE1Q9UJT0 475 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 SQORQ9Y6N5 450 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 WDR81Q562E7 1941 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 SMIM35A0A1B0GVV1 85 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 BACH1O14867 736 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 MAGEB2O15479 319 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 SLC26A4O43511 780 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 SORBS3O60504 671 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 XRCC6P12956 609 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 INSRRP14616 1297 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 ATP4AP20648 1035 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 ITGB8P26012 769 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 QARSP47897 775 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.482e-7■□□□□ 10.5
UBE2D3-212ENST00000502563 GRIK4Q16099 956 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 XKR3Q5GH77 459 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 MARCH8Q5T0T0 291 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 NME8Q8N427 588 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 IGSF22Q8N9C0 903 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 RAB34Q9BZG1 259 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 SAMM50Q9Y512 469 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 PCDHA2Q9Y5H9 948 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
UBE2D3-212ENST00000502563 ZBTB42B2RXF5 422 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 ZNF862O60290 1169 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 MARCH6O60337 910 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 CXCL10P02778 98 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 OATP04181 439 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 IQCF3P0C7M6 154 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 CKBP12277 381 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 SELPP16109 830 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 MCM7P33993 719 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 FOSBP53539 338 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 ATP2C1P98194 919 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 FPGSQ05932 587 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 BECN1Q14457 450 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 HIC1Q14526 733 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 TARBP2Q15633 366 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 MCTP1Q6DN14 999 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 RPUSD2Q8IZ73 545 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 POLR3CQ9BUI4 534 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 ZSWIM4Q9H7M6 989 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 TUFT1Q9NNX1 390 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 SETD4Q9NVD3 440 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 KDM3AQ9Y4C1 1321 aa12.05□□□□□ -0.48
UBE2D3-212ENST00000502563 RANBP2P49792 3224 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 IGKV6-21A0A0C4DH24 114 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 EML1O00423 815 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 TREHO43280 583 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 GAS2O43903 313 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 STBD1O95210 358 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 HSP90AA1P07900 732 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 SYN1P17600 705 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 MARK3P27448 753 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 RPA1P27694 616 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 CDC42EP1Q00587 391 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 PRKCEQ02156 737 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 RESTQ13127 1097 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 PTGDRQ13258 359 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 HAUS3Q68CZ6 603 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 ATL3Q6DD88 541 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 TRAF7Q6Q0C0 670 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 RSPH3Q86UC2 560 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 LINC01465Q8N7H1 131 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 RETREG2Q8NC44 543 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 BADQ92934 168 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 AK8Q96MA6 479 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 CEP89Q96ST8 783 aa12.04□□□□□ -0.48
UBE2D3-212ENST00000502563 CHMP2AO43633 222 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 SLITRK3O94933 977 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 C22orf31O95567 290 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 CYP2C9P11712 490 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 TXKP42681 527 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 ZNF174Q15697 407 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 LRIT3Q3SXY7 679 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
UBE2D3-212ENST00000502563 MTHFD1LQ6UB35 978 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms