RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 STK31Q9BXU1 1019 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 TRMT1Q9NXH9 659 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 CGNQ9P2M7 1197 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 FCF1Q9Y324 198 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 ANKRD34BA5PLL1 514 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 B4E1Z4 1266 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 IPO7O95373 1038 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 CCDC172P0C7W6 258 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 PDIA3P30101 505 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 SLC12A2P55011 1212 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 DHX9Q08211 1270 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 TTC31Q49AM3 519 aaPredicted RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 USP53Q70EK8 1073 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 DENND1CQ8IV53 801 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ZC3H7AQ8IWR0 971 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 SULF2Q8IWU5 870 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ADAMTS18Q8TE60 1221 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 NANOS1Q8WY41 292 aaKnown RBP4.22□□□□□ -1.73
SUB1-202ENST00000502453 ARL8AQ96BM9 186 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 ACSBG1Q96GR2 724 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 HAUS7Q99871 368 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 MAGEH1Q9H213 219 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 SIK3Q9Y2K2 1263 aa4.22□□□□□ -1.73
SUB1-202ENST00000502453 LCHNA4D1U4 455 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 GOLGA8CPA6NN73 597 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 IRAK2O43187 625 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 MT-ND3P03897 115 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 CCDC159P0C7I6 412 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 ESRRAP11474 423 aaPredicted RBP4.21□□□□□ -1.73
SUB1-202ENST00000502453 ATP4AP20648 1035 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 TARSP26639 723 aaKnown RBP4.21□□□□□ -1.73
SUB1-202ENST00000502453 RCAN1P53805 252 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 UBXN2AP68543 259 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 KRT83P78385 493 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 PMS2P11Q13670 270 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 SMAD2Q15796 467 aaKnown RBP4.21□□□□□ -1.73
SUB1-202ENST00000502453 CLEC16AQ2KHT3 1053 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 ZNF295-AS1Q8N0V1 137 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 TMEM102Q8N9M5 508 aaPredicted RBP4.21□□□□□ -1.73
SUB1-202ENST00000502453 TRIML1Q8N9V2 468 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 CNTNAP3BQ96NU0 1288 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 CNTNAP3Q9BZ76 1288 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 VPS28Q9UK41 221 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 GJD2Q9UKL4 321 aa4.21□□□□□ -1.73
SUB1-202ENST00000502453 A0A096LPE4 126 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 A0A1W2PPZ6 126 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 PGPEP1LA6NFU8 196 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 NOP56O00567 594 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 UBXN7O94888 489 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 FSBPO95073 299 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 KIF20AO95235 890 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 ATE1O95260 518 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CCDC175P0C221 793 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 POLD2P49005 469 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 NR1H2P55055 460 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 MRPL28Q13084 256 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 PLCL1Q15111 1095 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CNN3Q15417 329 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 PRSS53Q2L4Q9 553 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 WIPI1Q5MNZ9 446 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 JMJD6Q6NYC1 403 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 KCNV1Q6PIU1 500 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 DPP9Q86TI2 863 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CEP97Q8IW35 865 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 SLC44A2Q8IWA5 706 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 GABPB2Q8TAK5 448 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 SSH3Q8TE77 659 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 ASB2Q96Q27 587 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 STARD7Q9NQZ5 370 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CHCHD3Q9NX63 227 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 GMIPQ9P107 970 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 PCDHGB4Q9UN71 923 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 KDM6BO15054 1643 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CBX4O00257 560 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 AP3D1O14617 1153 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 SKAP2O75563 359 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 DDX58O95786 925 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 GUCA1CO95843 209 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 ALDH2P05091 517 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 ATP2A2P16615 1042 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 BMP6P22004 513 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CACNB3P54284 484 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 RAPH1Q70E73 1250 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 CHD1LQ86WJ1 897 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 TEX9Q8N6V9 391 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 MUL1Q969V5 352 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 NUP62CLQ9H1M0 184 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 KCTD10Q9H3F6 313 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 RWDD1Q9H446 243 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 ZFYVE1Q9HBF4 777 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 GJB4Q9NTQ9 266 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 DNAJC28Q9NX36 388 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 HERC5Q9UII4 1024 aaKnown RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 RPS6KA6Q9UK32 745 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 ZNF214Q9UL59 606 aaPredicted RBP4.21□□□□□ -1.74
SUB1-202ENST00000502453 ASXL2Q76L83 1435 aa4.21□□□□□ -1.74
SUB1-202ENST00000502453 FAM25EA8MYX2 175 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms