RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 CYP2C9P11712 490 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 KRT76Q01546 638 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
ERCC8-208ENST00000497892 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 GLG1Q92896 1179 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 PCYT2Q99447 389 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 SMARCAD1Q9H4L7 1026 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
ERCC8-208ENST00000497892 MYH9P35579 1960 aaKnown RBP12.72□□□□□ -0.37
ERCC8-208ENST00000497892 KAT6AQ92794 2004 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 CCNT1O60563 726 aaKnown RBP12.71□□□□□ -0.37
ERCC8-208ENST00000497892 GAS7O60861 476 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 PSMD10O75832 226 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 CYP2C18P33260 490 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 SLC26A2P50443 739 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 FPGSQ05932 587 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 CUL4AQ13619 759 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 HIC1Q14526 733 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 PLPPR4Q7Z2D5 763 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 CCDC60Q8IWA6 550 aaPredicted RBP12.71□□□□□ -0.37
ERCC8-208ENST00000497892 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
ERCC8-208ENST00000497892 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.37
ERCC8-208ENST00000497892 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 AZI2Q9H6S1 392 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
ERCC8-208ENST00000497892 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.37
ERCC8-208ENST00000497892 NRCAMQ92823 1304 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 TBX3O15119 743 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 MARK3P27448 753 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 GJB2P29033 226 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 STAT5BP51692 787 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 RBL2Q08999 1139 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 C6orf132Q5T0Z8 1188 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 MIS18BP1Q6P0N0 1132 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 B3GNT9Q6UX72 402 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 SERINC5Q86VE9 423 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 DDX12PQ92771 950 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 GJA10Q969M2 543 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
ERCC8-208ENST00000497892 SCN5AQ14524 2016 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 K7ELQ4 463 aaPredicted RBP12.69□□□□□ -0.38
ERCC8-208ENST00000497892 BACH1O14867 736 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 CSF2RAP15509 400 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 U2AF2P26368 475 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERCC8-208ENST00000497892 JAK3P52333 1124 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 ADAM17P78536 824 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 ZNF200P98182 395 aaPredicted RBP12.69□□□□□ -0.38
ERCC8-208ENST00000497892 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 PTK7Q13308 1070 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 BFSP2Q13515 415 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 FAM160B1Q5W0V3 765 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 DHX38Q92620 1227 aaKnown RBP12.69□□□□□ -0.38
ERCC8-208ENST00000497892 FAM20AQ96MK3 541 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 SETD4Q9NVD3 440 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 VAV3Q9UKW4 847 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
ERCC8-208ENST00000497892 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 WNT7AO00755 349 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 TREHO43280 583 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 CHMP2AO43633 222 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 NEMFO60524 1076 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 PSAPP07602 524 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 GNAT1P11488 350 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 SFNP31947 248 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 EPHB4P54760 987 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 CCL23P55773 120 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.38
ERCC8-208ENST00000497892 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
ERCC8-208ENST00000497892 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 GRIK4Q16099 956 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 TRIM71Q2Q1W2 868 aaKnown RBP12.68□□□□□ -0.38
ERCC8-208ENST00000497892 HABP4Q5JVS0 413 aaKnown RBP12.68□□□□□ -0.38
ERCC8-208ENST00000497892 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 RDM1Q8NG50 284 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 HAS1Q92839 578 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
ERCC8-208ENST00000497892 WNT8BQ93098 351 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms