RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 NFRKBQ6P4R8 1299 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 TMTC3Q6ZXV5 915 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 DHX32Q7L7V1 743 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 MICU3Q86XE3 530 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 TMTC2Q8N394 836 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 ATXN2LQ8WWM7 1075 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 KCNB2Q92953 911 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 RRP36Q96EU6 259 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 PGBD1Q96JS3 809 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 SPATA33Q96N06 139 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 C16orf70Q9BSU1 422 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 MTA3Q9BTC8 594 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 MAP3K20Q9NYL2 800 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 SLC12A7Q9Y666 1083 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 TRANK1O15050 2925 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 ZBBXA8MT70 800 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SPATA31C2B4DYI2 1134 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 DTNBO60941 627 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SUPT20HL2P0C7V6 817 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 ADD1P35611 737 aaKnown RBP8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 PLA2G5P39877 138 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 APOBRQ0VD83 1088 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 DGKDQ16760 1214 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 KIAA0753Q2KHM9 967 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 UTP14CQ5TAP6 766 aaKnown RBP8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 APOA5Q6Q788 366 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SGMS1Q86VZ5 419 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SMARCC2Q8TAQ2 1214 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 UHRF1Q96T88 793 aaPredicted RBP8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 EPHX3Q9H6B9 360 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 TMEM260Q9NX78 707 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 THEGQ9P2T0 379 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 GTF2IRD1Q9UHL9 959 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 PCDHA6Q9UN73 950 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 PCDHA8Q9Y5H6 950 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 SNX14Q9Y5W7 946 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 GBF1Q92538 1859 aa8.42□□□□□ -1.06
PRPF4B-208ENST00000490653 FRMPD4Q14CM0 1322 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 CNTNAP5Q8WYK1 1306 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 KLF18A0A0U1RQI7 1052 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 NBNO60934 754 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 PPFIA4O75335 1185 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 HOXD8P13378 290 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 ITGB5P18084 799 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 ICAM3P32942 547 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 KIF5BP33176 963 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 GNAQP50148 359 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 SP4Q02446 784 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 PTPN11Q06124 597 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 Q6ZUG5 572 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 SESTD1Q86VW0 696 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 RETREG2Q8NC44 543 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 PPTC7Q8NI37 304 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 CYP2W1Q8TAV3 490 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 INPP4AQ96PE3 977 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 UIMC1Q96RL1 719 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 LZTS2Q9BRK4 669 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 SEZ6LQ9BYH1 1024 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 RNPEPQ9H4A4 650 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 CERS4Q9HA82 394 aa8.41□□□□□ -1.06
PRPF4B-208ENST00000490653 GSTTP1A0A1W2PQM5 241 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 TREHO43280 583 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 ZBTB43O43298 467 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 F2P00734 622 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 LGALS2P05162 132 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 CALM1P0DP23 149 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 CALM2P0DP24 149 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 CALM3P0DP25 149 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 ARP10275 920 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 TGFB3P10600 412 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 CKBP12277 381 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 HSPA4P34932 840 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 NR5A1Q13285 461 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 MBTPS1Q14703 1052 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 RTN1Q16799 776 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 ZNF618Q5T7W0 954 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 HEATR3Q7Z4Q2 680 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 C7orf31Q8N865 590 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 CUL5Q93034 780 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms