RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SOX10P56693 466 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 NRG1Q02297 640 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 CACNB2Q08289 660 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 ADGRE1Q14246 886 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 QRICH1Q2TAL8 776 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 MUM1L1Q5H9M0 696 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 APOA5Q6Q788 366 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 NSMFQ6X4W1 530 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 BRF1Q92994 677 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 MTMR8Q96EF0 704 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 RRP36Q96EU6 259 aaKnown RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 TCEANC2Q96MN5 208 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 MYL10Q9BUA6 226 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 GSX2Q9BZM3 304 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 IGFLR1Q9H665 355 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 A1CFQ9NQ94 594 aaKnown RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 DNAJB12Q9NXW2 375 aaKnown RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 ADD3Q9UEY8 706 aaKnown RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
COL8A1-207ENST00000483969 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 GREB1LQ9C091 1923 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-207ENST00000483969 CASP8AP2Q9UKL3 1982 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 ASB14A6NK59 587 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 B4DLN1 442 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 SGPL1O95470 568 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CNGA1P29973 690 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CYP2C19P33261 490 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CCINQ13939 588 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 BAATQ14032 418 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MBTPS1Q14703 1052 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 PCSK7Q16549 785 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 USH1GQ495M9 461 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MAP3K21Q5TCX8 1036 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MAMDC4Q6UXC1 1216 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 RNF207Q6ZRF8 634 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MICU3Q86XE3 530 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CCDC144CPQ8IYA2 1237 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 PIGSQ96S52 555 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MPHOSPH6Q99547 160 aaKnown RBP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 AGXT2Q9BYV1 514 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 PDRG1Q9NUG6 133 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 MAP3K20Q9NYL2 800 aaKnown RBP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CYP39A1Q9NYL5 469 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 FLRT1Q9NZU1 646 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
COL8A1-207ENST00000483969 BRPF3Q9ULD4 1205 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
COL8A1-207ENST00000483969 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 NFIBO00712 420 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 CYTH3O43739 400 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 MSCO60682 206 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 IGHA2P01877 340 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 RXRAP19793 462 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 NFKB1P19838 968 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 GJA8P48165 433 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 RGS19P49795 217 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 APOBRQ0VD83 1088 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 PSAPL1Q6NUJ1 521 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 SRBD1Q8N5C6 995 aaKnown RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 NUDT8Q8WV74 236 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 LENG1Q96BZ8 264 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 ALDH8A1Q9H2A2 487 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 UPF2Q9HAU5 1272 aaKnown RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 PAK6Q9NQU5 681 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-207ENST00000483969 NAGPAQ9UK23 515 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
COL8A1-207ENST00000483969 PTPRFP10586 1907 aa10.27□□□□□ -0.76
COL8A1-207ENST00000483969 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 H2AFB2P0C5Z0 115 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 SELPP16109 830 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 EN2P19622 333 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-207ENST00000483969 CALML3P27482 149 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 EVCP57679 992 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 PTK7Q13308 1070 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 C8orf34Q49A92 452 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms