RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ENPP3O14638 875 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 GOLGA8HP0CJ92 632 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 UBA1P22314 1058 aaKnown RBP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 HOXC8P31273 242 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 CA8P35219 290 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 UBE3AQ05086 875 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 SYCP1Q15431 976 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 GPATCH4Q5T3I0 446 aaKnown RBP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 PDE12Q6L8Q7 609 aaKnown RBP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 TAF2Q6P1X5 1199 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 TSHZ1Q6ZSZ6 1077 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 TEX2Q8IWB9 1127 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 CCDC105Q8IYK2 499 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 VN1R2Q8NFZ6 395 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 LMBR1Q8WVP7 490 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 USP26Q9BXU7 913 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 SMOC2Q9H3U7 446 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 COL20A1Q9P218 1284 aa7.83□□□□□ -1.16
LSAMP-204ENST00000475403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.83□□□□□ -1.16
LSAMP-204ENST00000475403 ZFHX4Q86UP3 3567 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 MYH6P13533 1939 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CCDC66A2RUB6 948 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 IGHDP01880 384 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CHRNA1P02708 482 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 ASGR2P07307 311 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 SCG2P13521 617 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 AOC1P19801 751 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CCND2P30279 289 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 SP4Q02446 784 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 LPIN1Q14693 890 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 GNPTABQ3T906 1256 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 DTWD2Q8NBA8 298 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 ATP8B4Q8TF62 1192 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 TBC1D5Q92609 795 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CASP10Q92851 521 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 SEC62Q99442 399 aaKnown RBP7.82□□□□□ -1.16
LSAMP-204ENST00000475403 RTP3Q9BQQ7 232 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 FTHL17Q9BXU8 183 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 CHMP4BQ9H444 224 aaKnown RBP7.82□□□□□ -1.16
LSAMP-204ENST00000475403 TMEM260Q9NX78 707 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 PUF60Q9UHX1 559 aaKnown RBP7.82□□□□□ -1.16
LSAMP-204ENST00000475403 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
LSAMP-204ENST00000475403 MYO10Q9HD67 2058 aa7.82□□□□□ -1.16
LSAMP-204ENST00000475403 NRCAMQ92823 1304 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TBKBP1A7MCY6 615 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 ORC4O43929 436 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 SMARCA5O60264 1052 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-204ENST00000475403 FGF18O76093 207 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TGFB3P10600 412 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 SDHBP21912 280 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 CD52P31358 61 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 MTHFRP42898 656 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 NOVP48745 357 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 ITIH3Q06033 890 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PAK2Q13177 524 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 RSPO4Q2I0M5 234 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-204ENST00000475403 FBXO47Q5MNV8 452 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TSHZ3Q63HK5 1081 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 CWF19L1Q69YN2 538 aaKnown RBP7.81□□□□□ -1.16
LSAMP-204ENST00000475403 SYCE2Q6PIF2 218 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 RUFY4Q6ZNE9 571 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PLCD3Q8N3E9 789 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PDCL2Q8N4E4 241 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TMEM87AQ8NBN3 555 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PANK1Q8TE04 598 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 RUBCNQ92622 972 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 CHAMP1Q96JM3 812 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TCF25Q9BQ70 676 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PDCD2LQ9BRP1 358 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 S1PR5Q9H228 398 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 CPVLQ9H3G5 476 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 POMKQ9H5K3 350 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 EHMT1Q9H9B1 1298 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 LIMD1Q9UGP4 676 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TUBE1Q9UJT0 475 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 KIF3AQ9Y496 699 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 PCDHB7Q9Y5E2 793 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 CDY2AQ9Y6F7 541 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 R4GN57 208 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 ACACBO00763 2458 aa7.81□□□□□ -1.16
LSAMP-204ENST00000475403 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 RPLP2P05387 115 aaKnown RBP7.8□□□□□ -1.16
LSAMP-204ENST00000475403 GATMP50440 423 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 ERVFC1P60507 584 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 SP2Q02086 613 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 APOBRQ0VD83 1088 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 PPFIA1Q13136 1202 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 NEDD9Q14511 834 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 PGM5Q15124 567 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 QRICH1Q2TAL8 776 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 IER5Q5VY09 327 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 METTL7BQ6UX53 244 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 TMEM184AQ6ZMB5 413 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms