RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 AMPHP49418 695 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 CUL4BQ13620 913 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 COL9A2Q14055 689 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 INPP5AQ14642 412 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 NAA25Q14CX7 972 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 LRFN4Q6PJG9 635 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 TOM1L2Q6ZVM7 507 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 SESTD1Q86VW0 696 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 VPS37AQ8NEZ2 397 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 TEKT4Q8WW24 435 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 RABGGTAQ92696 567 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 KAT2BQ92831 832 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 FUT8Q9BYC5 575 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 VIPAS39Q9H9C1 493 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 ACTR5Q9H9F9 607 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 PCDH18Q9HCL0 1135 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 PAPOLBQ9NRJ5 636 aaKnown RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 RAD18Q9NS91 495 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 KLC4Q9NSK0 619 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 TFCP2L1Q9NZI6 479 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 PAIP2BQ9ULR5 123 aaKnown RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 TMCO1Q9UM00 188 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 RABL2BQ9UNT1 228 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 ADAMTS8Q9UP79 889 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 ZNF148Q9UQR1 794 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 FAM169AQ9Y6X4 670 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 CRB1P82279 1406 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 CPDO75976 1380 aa8.09□□□□□ -1.12
GPNMB-209ENST00000474157 GOLGA6L4A6NEF3 574 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 TMEM221A6NGB7 291 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 SRRM3A6NNA2 597 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 DCDC2CA8MYV0 355 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 RNF8O76064 485 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC166P0CW27 439 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 HSPA1AP0DMV8 641 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 HSPA1BP0DMV9 641 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 ATP5JP18859 108 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 FNTAP49354 379 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 NLRP5P59047 1200 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 NUCB1Q02818 461 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 SNCBQ16143 134 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 INF2Q27J81 1249 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 EXOSC6Q5RKV6 272 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 ZSCAN25Q6NSZ9 544 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 MIS18BP1Q6P0N0 1132 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 CWC27Q6UX04 472 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 CRELD2Q6UXH1 353 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 LCA5Q86VQ0 697 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 RPAP2Q8IXW5 612 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 TRMT2AQ8IZ69 625 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 STK11IPQ8N1F8 1099 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 RSPH1Q8WYR4 309 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 ELMO3Q96BJ8 720 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
GPNMB-209ENST00000474157 CD2APQ9Y5K6 639 aa8.08□□□□□ -1.12
GPNMB-209ENST00000474157 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 PRR36Q9H6K5 1346 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC162PA2VCL2 907 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 B4DLN1 442 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 SLC27A2O14975 620 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 MYO1BO43795 1136 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 GCP02774 474 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 GSDMDP57764 484 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 PHEXP78562 749 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 FSTL1Q12841 308 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 KCNB1Q14721 858 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 GRIK4Q16099 956 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 SEPT7Q16181 437 aaKnown RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 ERCC6LQ2NKX8 1250 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 AKAP4Q5JQC9 854 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 DUSP27Q5VZP5 1158 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 CCDC81Q6ZN84 652 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 GK5Q6ZS86 529 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 LRRC43Q8N309 656 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 C17orf53Q8N3J3 647 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 P3H4Q92791 437 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 IWS1Q96ST2 819 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 SENP7Q9BQF6 1050 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 TCHPQ9BT92 498 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 RSPH9Q9H1X1 276 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 C14orf93Q9H972 538 aaKnown RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 PUF60Q9UHX1 559 aaKnown RBP8.07□□□□□ -1.12
GPNMB-209ENST00000474157 CROTQ9UKG9 612 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 ITM2BQ9Y287 266 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 EXOC6BQ9Y2D4 811 aa8.07□□□□□ -1.12
GPNMB-209ENST00000474157 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms