RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ACTR2P61160 394 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 PTPN11Q06124 597 aaPredicted RBP13.45□□□□□ -0.26
CLRN1-205ENST00000472224 NR5A1Q13285 461 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 C8orf76Q96K31 380 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
CLRN1-205ENST00000472224 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
CLRN1-205ENST00000472224 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 C17orf102A2RUQ5 167 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 BACH1O14867 736 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 CIITAP33076 1130 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
CLRN1-205ENST00000472224 ZNF200P98182 395 aaPredicted RBP13.44□□□□□ -0.26
CLRN1-205ENST00000472224 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
CLRN1-205ENST00000472224 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 NOC4LQ9BVI4 516 aaKnown RBP13.44□□□□□ -0.26
CLRN1-205ENST00000472224 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 COG5Q9UP83 839 aa13.44□□□□□ -0.26
CLRN1-205ENST00000472224 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 PRR33A8MZF0 331 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 MSH4O15457 936 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 CHMP2AO43633 222 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 GAS7O60861 476 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 ARHGEF15O94989 841 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 MMP1P03956 469 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 MCM2P49736 904 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 USP11P51784 963 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
CLRN1-205ENST00000472224 SAFBQ15424 915 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLRN1-205ENST00000472224 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 CCDC155Q8N6L0 562 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 GJA10Q969M2 543 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 LENG9Q96B70 501 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 SCLYQ96I15 445 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
CLRN1-205ENST00000472224 CERS4Q9HA82 394 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
CLRN1-205ENST00000472224 PCDHB8Q9UN66 801 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 TET1Q8NFU7 2136 aa13.43□□□□□ -0.26
CLRN1-205ENST00000472224 EVPLQ92817 2033 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 BTBD18B2RXH4 712 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 SLC37A4O43826 429 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 EDIL3O43854 480 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
CLRN1-205ENST00000472224 CCNE2O96020 404 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 CA3P07451 260 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 NHLH1Q02575 133 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 BFSP2Q13515 415 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 EARS2Q5JPH6 523 aaKnown RBP13.42□□□□□ -0.26
CLRN1-205ENST00000472224 LRCH2Q5VUJ6 765 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 ATP6V0A1Q93050 837 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 HLA-CQ95604 372 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 TEKT3Q9BXF9 490 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
CLRN1-205ENST00000472224 MARCH6O60337 910 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 GNAT1P11488 350 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 IGBP1P78318 339 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 KRT76Q01546 638 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 HIC1Q14526 733 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 Q4G0T1 1027 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
CLRN1-205ENST00000472224 MIS18BP1Q6P0N0 1132 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
CLRN1-205ENST00000472224 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 PCYT2Q99447 389 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
CLRN1-205ENST00000472224 TRIOO75962 3097 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 TREHO43280 583 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 LGR5O75473 907 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 ATP2A2P16615 1042 aaKnown RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 STAT5BP51692 787 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 PTK7Q13308 1070 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 GRIK4Q16099 956 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 MOXD1Q6UVY6 613 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 CCDC60Q8IWA6 550 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms