RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TRAPPC12Q8WVT3 735 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 HERVK_113Q902F9 699 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 TNPO1Q92973 898 aaKnown RBP14.56□□□□□ -0.08
COL5A1-206ENST00000465877 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 VAV3Q9UKW4 847 aa14.56□□□□□ -0.08
COL5A1-206ENST00000465877 MAFBQ9Y5Q3 323 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-206ENST00000465877 CHD7Q9P2D1 2997 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 RRN3P2A6NIE6 340 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 WNT7AO00755 349 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 TBX3O15119 743 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 NEMFO60524 1076 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 NBNO60934 754 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 FGBP02675 491 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 CXCL10P02778 98 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 PRKCEQ02156 737 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 UGCGQ16739 394 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 MIER3Q7Z3K6 550 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 FAM167AQ96KS9 214 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 FAM20AQ96MK3 541 aa14.55□□□□□ -0.08
COL5A1-206ENST00000465877 FOXP1Q9H334 677 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-206ENST00000465877 CXXC1Q9P0U4 656 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-206ENST00000465877 ZBBXA8MT70 800 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 RSPH10B2B2RC85 870 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 KIF28PB7ZC32 967 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 HBP1O60381 514 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 OATP04181 439 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 RSPH10BP0C881 870 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 ACTN1P12814 892 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 ATP4AP20648 1035 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 GJB2P29033 226 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 SMAD3P84022 425 aaKnown RBP14.54□□□□□ -0.08
COL5A1-206ENST00000465877 PPP2R5CQ13362 524 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 GNL2Q13823 731 aaKnown RBP14.54□□□□□ -0.08
COL5A1-206ENST00000465877 GPNMBQ14956 572 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
COL5A1-206ENST00000465877 ZBTB10Q96DT7 871 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 FTOQ9C0B1 505 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL5A1-206ENST00000465877 NLRC5Q86WI3 1866 aa14.54□□□□□ -0.08
COL5A1-206ENST00000465877 COL6A3P12111 3177 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 ZBTB42B2RXF5 422 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 ZNF862O60290 1169 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 BAIAP3O94812 1187 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 RPLP2P05387 115 aaKnown RBP14.53□□□□□ -0.08
COL5A1-206ENST00000465877 FAM109BQ6ICB4 259 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-206ENST00000465877 GPR153Q6NV75 609 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 CNKSR3Q6P9H4 555 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 RPAINQ86UA6 219 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 NOSTRINQ8IVI9 506 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 SLFN12Q8IYM2 578 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 DNAJB3Q8WWF6 145 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 HAS1Q92839 578 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 FAM49AQ9H0Q0 323 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-206ENST00000465877 CEP131Q9UPN4 1083 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 SMC3Q9UQE7 1217 aa14.53□□□□□ -0.08
COL5A1-206ENST00000465877 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-206ENST00000465877 TRANK1O15050 2925 aa14.52□□□□□ -0.08
COL5A1-206ENST00000465877 RBAK-RBAKDNI3L0D1 243 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 MARCH6O60337 910 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 C22orf31O95567 290 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 MGAT3Q09327 533 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 CALCRLQ16602 461 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 ZNF484Q5JVG2 852 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 MTHFD1LQ6UB35 978 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.09
COL5A1-206ENST00000465877 RSPH3Q86UC2 560 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 BANK1Q8NDB2 785 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 SEPT9Q9UHD8 586 aaPredicted RBP14.52□□□□□ -0.09
COL5A1-206ENST00000465877 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.09
COL5A1-206ENST00000465877 RALGAPA2Q2PPJ7 1873 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 KIAA1671Q9BY89 1806 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 SMIM35A0A1B0GVV1 85 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 EML1O00423 815 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 BAG4O95429 457 aaKnown RBP14.51□□□□□ -0.09
COL5A1-206ENST00000465877 U2AF2P26368 475 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL5A1-206ENST00000465877 MCM7P33993 719 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 MRPS6P82932 125 aaKnown RBP14.51□□□□□ -0.09
COL5A1-206ENST00000465877 ORC2Q13416 577 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-206ENST00000465877 CUL4AQ13619 759 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 TCTN1Q2MV58 587 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 PLEKHG4Q58EX7 1191 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 NCAPH2Q6IBW4 605 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 SLC4A7Q9Y6M7 1214 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 COL4A6Q14031 1691 aa14.51□□□□□ -0.09
COL5A1-206ENST00000465877 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-206ENST00000465877 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.5□□□□□ -0.09
COL5A1-206ENST00000465877 GRXCR1A8MXD5 290 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 CHRNA1P02708 482 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 ATP2B1P20020 1258 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 DNAJB2P25686 324 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 TRAPPC10P48553 1259 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 WDR5P61964 334 aaKnown RBP14.5□□□□□ -0.09
COL5A1-206ENST00000465877 TMEM62Q0P6H9 643 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 TTC38Q5R3I4 469 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 ZNF697Q5TEC3 545 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 LXNQ9BS40 222 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms