RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CCND1P24385 295 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 CASP14P31944 242 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 LETM2Q2VYF4 491 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 PIK3AP1Q6ZUJ8 805 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 TMCO5AQ8N6Q1 288 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 MRRFQ96E11 262 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 CSADQ9Y600 493 aa10.53□□□□□ -0.72
UFD1-205ENST00000459854 COL5A3P25940 1745 aaPredicted RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 ZC3H4Q9UPT8 1303 aaKnown RBP10.53□□□□□ -0.72
UFD1-205ENST00000459854 SEMA3FQ13275 785 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 SLC39A14Q15043 492 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 FAM173BQ6P4H8 233 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 SESTD1Q86VW0 696 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 C10orf88Q9H8K7 445 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 STK17AQ9UEE5 414 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 NRBP1Q9UHY1 535 aa10.52□□□□□ -0.72
UFD1-205ENST00000459854 FOXP2O15409 715 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 ECEL1O95672 775 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 SPARCL1Q14515 664 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 HERC4Q5GLZ8 1057 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 PDZD4Q76G19 769 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 MAML3Q96JK9 1138 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 FMO2Q99518 471 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 IFT122Q9HBG6 1241 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 PALMDQ9NP74 551 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 CHCHD3Q9NX63 227 aaKnown RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 LCMT1Q9UIC8 334 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 SALL1Q9NSC2 1324 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 A0A1B0GW55 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 GPC4O75487 556 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L2P0CJ85 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L3P0CJ86 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L4P0CJ87 422 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L5P0CJ88 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L6P0CJ89 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4L7P0CJ90 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 IFNAR2P48551 515 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 SERPINB4P48594 390 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 CYLC2Q14093 348 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 PDXDC1Q6P996 788 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DACT3Q96B18 629 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 MYOZ2Q9NPC6 264 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DUX4Q9UBX2 424 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
UFD1-205ENST00000459854 BPIFB4P59827 614 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 PPP2R2AP63151 447 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 RASA3Q14644 834 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 GNPTABQ3T906 1256 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 ZBTB9Q96C00 473 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 CEP19Q96LK0 163 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 THAP9Q9H5L6 903 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
UFD1-205ENST00000459854 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 KLC1Q07866 573 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 SCARF1Q14162 830 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 CENPUQ71F23 418 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 TRIM55Q9BYV6 548 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 MRPL46Q9H2W6 279 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.51□□□□□ -0.73
UFD1-205ENST00000459854 NOC2LQ9Y3T9 749 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 GSPT1P15170 499 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 SERPINB10P48595 397 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 CORO7P57737 925 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 SLC20A2Q08357 652 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 MYO1EQ12965 1108 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 FSCBQ5H9T9 825 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 JADE1Q6IE81 842 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 FAM210AQ96ND0 272 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 TRAIPQ9BWF2 469 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 TBC1D23Q9NUY8 699 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 PFDN6O15212 129 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 GYG2O15488 501 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 MMEP08473 750 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 KRT39Q6A163 491 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 ZNF354CQ86Y25 554 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 TMOD4Q9NZQ9 345 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 NDUFA10O95299 355 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 APOA1P02647 267 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 RPN1P04843 607 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 VIL1P09327 827 aaKnown RBP10.51□□□□□ -0.73
UFD1-205ENST00000459854 ACTN1P12814 892 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 CPA1P15085 419 aa10.51□□□□□ -0.73
UFD1-205ENST00000459854 EPHX2P34913 555 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms