RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 PDE2AO00408 941 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 PLSCR1O15162 318 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 PPFIA4O75335 1185 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 MED24O75448 989 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 PRPF6O94906 941 aaKnown RBP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 NDUFB10O96000 172 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 POTEIP0CG38 1075 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 MAPTP10636 758 aaKnown RBP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 UCHL3P15374 230 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 STAT1P42224 750 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 SCNN1DP51172 638 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 RBM5P52756 815 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 SLC20A2Q08357 652 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 CETN1Q12798 172 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 TNIP1Q15025 636 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ECM1Q16610 540 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 DACT2Q5SW24 774 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 NFRKBQ6P4R8 1299 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L6PQ6QN14 398 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 POTEEQ6S8J3 1075 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 SFR1Q86XK3 245 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 NELFCDQ8IXH7 590 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ACTRT1Q8TDG2 376 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 TMEM174Q8WUU8 243 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 TBC1D5Q92609 795 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 SH3GL2Q99962 352 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 REEP2Q9BRK0 252 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 TIPINQ9BVW5 301 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ZHX3Q9H4I2 956 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ZCCHC17Q9NP64 241 aaKnown RBP9.68□□□□□ -0.86
HDAC3-202ENST00000459727 VAV3Q9UKW4 847 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 DUSP10Q9Y6W6 482 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ANKRD31Q8N7Z5 1873 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 FRMPD4Q14CM0 1322 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 GOLGA6L10A6NI86 522 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SRRM3A6NNA2 597 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 H0YIN7 160 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 GCOM1H8Y6P7 765 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 TULP2O00295 520 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 ZNF185O15231 689 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 P4HA2O15460 535 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 ECE2O60344 883 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 PALMO75781 387 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 GCNT3O95395 438 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SYF2O95926 243 aaKnown RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 H2AFZP0C0S5 128 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 POLR2MP0CAP2 368 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SPATA31C1P0DKV0 1188 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 GBP1P32455 592 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 NFIAQ12857 509 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 DOK7Q18PE1 504 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 H2AFVQ71UI9 128 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SND1Q7KZF4 910 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 NIPA1Q7RTP0 329 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 CLEC10AQ8IUN9 316 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SLC9A9Q8IVB4 645 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 CD302Q8IX05 232 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 LENG9Q96B70 501 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 LRRC45Q96CN5 670 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 DRC1Q96MC2 740 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 INPP4AQ96PE3 977 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 IWS1Q96ST2 819 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 EIF2AK1Q9BQI3 630 aaKnown RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 LRRC1Q9BTT6 524 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 DEFB129Q9H1M3 183 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SLITRK6Q9H5Y7 841 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 DNAJC18Q9H819 358 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 PARVGQ9HBI0 331 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 GDF3Q9NR23 364 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 SUCLA2Q9P2R7 463 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-202ENST00000459727 FRMD4BQ9Y2L6 1034 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
HDAC3-202ENST00000459727 PFASO15067 1338 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 A0A087X0T9 212 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 PGRMC1O00264 195 aaKnown RBP9.66□□□□□ -0.86
HDAC3-202ENST00000459727 MAPK13O15264 365 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 MSH4O15457 936 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 RAD21O60216 631 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 ZEB2O60315 1214 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 TLR2O60603 784 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 KIF4AO95239 1232 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FAM228BP0C875 321 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 HSPA6P17066 643 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 PON1P27169 355 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 GGCXP38435 758 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms