RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 FMNL3Q8IVF7 1028 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 ERMNQ8TAM6 284 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 BAP1Q92560 729 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 DDX12PQ92771 950 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 DNAJC19Q96DA6 116 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 PLIN2Q99541 437 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 CRACR2AQ9BSW2 395 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 JMJD4Q9H9V9 463 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 ARHGAP20Q9P2F6 1191 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 PCDHA12Q9UN75 941 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 COL2A1P02458 1487 aaPredicted RBP11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 CEP290O15078 2479 aa11.65□□□□□ -0.54
GTF3C2-206ENST00000454704 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.55
GTF3C2-206ENST00000454704 SIPA1L1O43166 1804 aa11.65□□□□□ -0.55
GTF3C2-206ENST00000454704 A0A0U1RQG5 324 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 FRMD3A2A2Y4 597 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 MARCH6O60337 910 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 TNNI2P48788 182 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 CACNB3P54284 484 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 IFI16Q16666 785 aaKnown RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 ZSCAN26Q16670 478 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 SLC4A8Q2Y0W8 1093 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 EMBQ6PCB8 327 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 CCNI2Q6ZMN8 369 aaPredicted RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 EIF1ADQ8N9N8 165 aaKnown RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.551e-12■□□□□ 9.2
GTF3C2-206ENST00000454704 MKL1Q969V6 931 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 VAT1LQ9HCJ6 419 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 VPS18Q9P253 973 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 CSADQ9Y600 493 aa11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
GTF3C2-206ENST00000454704 ERICH4A6NGS2 130 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 TULP2O00295 520 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 SLC37A4O43826 429 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 OPA1O60313 960 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 TDP2O95551 362 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 EIF4A3P38919 411 aaKnown RBP11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 GTF2A2P52657 109 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 EPHB4P54760 987 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 SFMBT2Q5VUG0 894 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 TRIM59Q8IWR1 403 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 ADGRF4Q8IZF3 695 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 ZNF333Q96JL9 665 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 ZFYVE28Q9HCC9 887 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 TMEM260Q9NX78 707 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 TRIM10Q9UDY6 481 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 HPCAL4Q9UM19 191 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 PTCH2Q9Y6C5 1203 aa11.63□□□□□ -0.55
GTF3C2-206ENST00000454704 LRRC53A6NM62 1247 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 GOLGA8KD6RF30 607 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 ENC1O14682 589 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 AKR1B1P15121 316 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 MUTP22033 750 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 LMAN1P49257 510 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 SLC20A2Q08357 652 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 CFAP221Q4G0U5 840 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 ALS2CLQ60I27 953 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 FRMD5Q7Z6J6 570 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 CAVIN3Q969G5 261 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 TEKT1Q969V4 418 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 COA7Q96BR5 231 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 OSBPL9Q96SU4 736 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 FAM107BQ9H098 131 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 METTL14Q9HCE5 456 aaKnown RBP11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 KCNMB3Q9NPA1 279 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 PLCB1Q9NQ66 1216 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 AIPL1Q9NZN9 384 aa11.62□□□□□ -0.55
GTF3C2-206ENST00000454704 FRMPD2Q68DX3 1309 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 RCCD1A6NED2 376 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 POTEMA6NI47 508 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 LRRIQ3A6PVS8 624 aaPredicted RBP11.61□□□□□ -0.55
GTF3C2-206ENST00000454704 ZNF263O14978 683 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms