RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 FAHP16930 419 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 IL13P35225 146 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 PLP2Q04941 152 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 GRIN1Q05586 938 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 PAN2Q504Q3 1202 aaKnown RBP6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 KCTD1Q719H9 257 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 ZCCHC14Q8WYQ9 949 aaKnown RBP6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 LCORQ96JN0 433 aaPredicted RBP6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 YTHDC1Q96MU7 727 aaKnown RBP6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 DHRS4Q9BTZ2 278 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 SNTG2Q9NY99 539 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 RBPJLQ9UBG7 517 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 DSEQ9UL01 958 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 MYO5CQ9NQX4 1742 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 NPHP4O75161 1426 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 KDM2BQ8NHM5 1336 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM221BA6H8Z2 402 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 ARVCFO00192 962 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 LTFP02788 710 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 COL6A1P12109 1028 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 PAK1Q13153 545 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 ZC3H12BQ5HYM0 836 aaKnown RBP6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 PRAMEF18Q5VWM3 479 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 TMC5Q6UXY8 1006 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 DTX3Q8N9I9 347 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 KISS1RQ969F8 398 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 MKL1Q969V6 931 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 MBD6Q96DN6 1003 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 RBM15Q96T37 977 aaKnown RBP eCLIP6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 DLL4Q9NR61 685 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 KIDINS220Q9ULH0 1771 aa6.35□□□□□ -1.39
GTF3C3-207ENST00000451088 MED14O60244 1454 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 XIRP1Q702N8 1843 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 PLATP00750 562 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 ITGB3P05106 788 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 GABREP78334 506 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 NFKB2Q00653 900 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 MEX3CQ5U5Q3 659 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 VASNQ6EMK4 673 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 BORAQ6PGQ7 559 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM124AQ86V42 546 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 LGI4Q8N135 537 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 PCDH19Q8TAB3 1148 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 RNF17Q9BXT8 1623 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-207ENST00000451088 JCADQ9P266 1359 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 ACOT7O00154 380 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 CKMP06732 381 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 NAT1P18440 290 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 SPATS1Q496A3 300 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 TBC1D10BQ4KMP7 808 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 PKN3Q6P5Z2 889 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 MTDHQ86UE4 582 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 TMEM168Q9H0V1 697 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 PCDHA8Q9Y5H6 950 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 ARHGAP5Q13017 1502 aa6.33□□□□□ -1.4
GTF3C3-207ENST00000451088 SETBP1Q9Y6X0 1596 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 B4GALT3O60512 393 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 CYP1A1P04798 512 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 CHGBP05060 677 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 GPR19Q15760 415 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 FBXW5Q969U6 566 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 SRPK3Q9UPE1 567 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 CLIP1P30622 1438 aa6.32□□□□□ -1.4
GTF3C3-207ENST00000451088 TNRQ92752 1358 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 SPAG9O60271 1321 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 ABCC1P33527 1531 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 CDK13Q14004 1512 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 CDC42BPBQ9Y5S2 1711 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 K7ESM1 405 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 AMY2AP04746 511 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 ADRB1P08588 477 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 ENO2P09104 434 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 AMY2BP19961 511 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 GUCY1A3Q02108 690 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 TRMT10BQ6PF06 316 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 ARHGAP36Q6ZRI8 547 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 C16orf59Q7L2K0 433 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 NLGN4XQ8N0W4 816 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 SRPK1Q96SB4 655 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
GTF3C3-207ENST00000451088 SSBP3Q9BWW4 388 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms