RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TRPC6Q9Y210 931 aa14.61□□□□□ -0.07
VPS33A-202ENST00000451053 TMEM150BA6NC51 233 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 PPP6R2O75170 966 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 OATP04181 439 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 LONP1P36776 959 aaKnown RBP14.6□□□□□ -0.07
VPS33A-202ENST00000451053 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
VPS33A-202ENST00000451053 RTP1P59025 263 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 NFKBIBQ15653 356 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 ECM1Q16610 540 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 TRIM60Q495X7 471 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 SPECC1Q5M775 1068 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 NFRKBQ6P4R8 1299 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 SESTD1Q86VW0 696 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 CATSPER3Q86XQ3 398 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 C7orf31Q8N865 590 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 NEK9Q8TD19 979 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 SNX29Q8TEQ0 813 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 POLR3CQ9BUI4 534 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-202ENST00000451053 GDPD2Q9HCC8 539 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 TUFT1Q9NNX1 390 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 SETD4Q9NVD3 440 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 GTF2IRD1Q9UHL9 959 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 BRCA2P51587 3418 aa14.6□□□□□ -0.07
VPS33A-202ENST00000451053 ALPK3Q96L96 1907 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 A0A087WWV3 80 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 GOLGA6L4A6NEF3 574 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ZBTB42B2RXF5 422 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ZBTB39O15060 712 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 INSRRP14616 1297 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 RPA1P27694 616 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ME1P48163 572 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ZNF200P98182 395 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 PPFIA1Q13136 1202 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 GRIK4Q16099 956 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 XKR3Q5GH77 459 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 AXDND1Q5T1B0 1012 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 KRT79Q5XKE5 535 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 HAUS3Q68CZ6 603 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 GDF6Q6KF10 455 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 POTEGQ6S5H5 508 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 C4orf19Q8IY42 314 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 LMBR1Q8WVP7 490 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 TRAPPC12Q8WVT3 735 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 FAM167AQ96KS9 214 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 AK8Q96MA6 479 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ZSWIM4Q9H7M6 989 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 TRMT13Q9NUP7 481 aaKnown RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 PCDHA7Q9UN72 937 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 ATP11BQ9Y2G3 1177 aa14.59□□□□□ -0.07
VPS33A-202ENST00000451053 MYH9P35579 1960 aaKnown RBP14.59□□□□□ -0.07
VPS33A-202ENST00000451053 C17orf102A2RUQ5 167 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 HBP1O60381 514 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 B4GALT4O60513 344 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 PQBP1O60828 265 aaKnown RBP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 CUTAO60888 179 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 PRPF40AO75400 957 aaKnown RBP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 LYPLA2O95372 231 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 HOXC8P31273 242 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 IGBP1P78318 339 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 TLE2Q04725 743 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 PTPN11Q06124 597 aaPredicted RBP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 ANO5Q75V66 913 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 CABP7Q86V35 215 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 FAM126BQ8IXS8 530 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 SYMPKQ92797 1274 aaKnown RBP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 ZBTB10Q96DT7 871 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 EPSTI1Q96J88 318 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 CTAGE1Q96RT6 745 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 SH2D3AQ9BRG2 576 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 TRPV6Q9H1D0 765 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 SEPT9Q9UHD8 586 aaPredicted RBP14.58□□□□□ -0.08
VPS33A-202ENST00000451053 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
VPS33A-202ENST00000451053 YWHABP31946 246 aaKnown RBP14.57□□□□□ -0.08
VPS33A-202ENST00000451053 UBE2HP62256 183 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 ADAM17P78536 824 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 GRB10Q13322 594 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
VPS33A-202ENST00000451053 PTGISQ16647 500 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 MARCH8Q5T0T0 291 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 ANKRD33Q7Z3H0 272 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
VPS33A-202ENST00000451053 PIGOQ8TEQ8 1089 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 PNMA5Q96PV4 448 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 PLIN2Q99541 437 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 NIFKQ9BYG3 293 aaKnown RBP14.57□□□□□ -0.08
VPS33A-202ENST00000451053 SEZ6LQ9BYH1 1024 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 NRBP2Q9NSY0 501 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
VPS33A-202ENST00000451053 KIAA1024Q9UPX6 916 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 NRCAMQ92823 1304 aa14.57□□□□□ -0.08
VPS33A-202ENST00000451053 RRN3P2A6NIE6 340 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 TREHO43280 583 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 MBD3O95983 291 aa14.56□□□□□ -0.08
VPS33A-202ENST00000451053 CD4P01730 458 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms