RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
HCG20-208ENST00000439406 UHRF1Q96T88 793 aaPredicted RBP8.68□□□□□ -1.02
HCG20-208ENST00000439406 GAS2L1Q99501 681 aaPredicted RBP8.68□□□□□ -1.02
HCG20-208ENST00000439406 CCDC8Q9H0W5 538 aaPredicted RBP8.68□□□□□ -1.02
HCG20-208ENST00000439406 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
HCG20-208ENST00000439406 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
HCG20-208ENST00000439406 FBRSQ9HAH7 460 aa8.68□□□□□ -1.02
HCG20-208ENST00000439406 DDX4Q9NQI0 724 aaKnown RBP8.68□□□□□ -1.02
HCG20-208ENST00000439406 RABGAP1Q9Y3P9 1069 aa8.68□□□□□ -1.02
HCG20-208ENST00000439406 A0A1W2PQH9 124 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 DYNC1I1O14576 645 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 SNPHO15079 494 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 TIMM44O43615 452 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 OFD1O75665 1012 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 LETM1O95202 739 aaPredicted RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 XRCC6P12956 609 aaKnown RBP eCLIP8.67□□□□□ -1.02
HCG20-208ENST00000439406 COPB2P35606 906 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 HTR3AP46098 478 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 DGKGP49619 791 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 POU5F1Q01860 360 aaKnown RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 RFX7Q2KHR2 1363 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 REC114Q7Z4M0 266 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 DZIP1Q86YF9 867 aaKnown RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 ANKRD44Q8N8A2 993 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 USP38Q8NB14 1042 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 C1orf131Q8NDD1 294 aaKnown RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 PJA1Q8NG27 643 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 PORCNQ9H237 461 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 LIN7BQ9HAP6 207 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 PRDM5Q9NQX1 630 aaPredicted RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 LATS2Q9NRM7 1088 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 INTS7Q9NVH2 962 aaKnown RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 THEGQ9P2T0 379 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 PI4KBQ9UBF8 816 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 NAP1L2Q9ULW6 460 aaPredicted RBP8.67□□□□□ -1.02
HCG20-208ENST00000439406 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 BDP1A6H8Y1 2624 aa8.67□□□□□ -1.02
HCG20-208ENST00000439406 LOC285556D6RIA3 1793 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 PDS5AQ29RF7 1337 aaKnown RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 TK2O00142 265 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 GPR39O43194 453 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 SLC26A4O43511 780 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 STRNO43815 780 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 SLURP2P0DP57 97 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 CASP2P42575 452 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 BTDP43251 543 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 MYBPC2Q14324 1141 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 GJC2Q5T442 439 aaPredicted RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 FOXP4Q8IVH2 680 aaPredicted RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 CDK15Q96Q40 435 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 SARGQ9BW04 601 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 DHX36Q9H2U1 1008 aaKnown RBP8.66□□□□□ -1.02
HCG20-208ENST00000439406 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 KLF15Q9UIH9 416 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 RCAN3Q9UKA8 241 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 GTF2A1LQ9UNN4 478 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 MYH2Q9UKX2 1941 aa8.66□□□□□ -1.02
HCG20-208ENST00000439406 FAM221AA4D161 298 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 KIAA0355O15063 1070 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 BRINP1O60477 761 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 CIAO1O76071 339 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 ABLIM3O94929 683 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 CT47B1P0C2W7 299 aaPredicted RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 L1CAMP32004 1257 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 GSTO1P78417 241 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 CCDC173Q0VFZ6 552 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 MAP7Q14244 749 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 KCTD2Q14681 263 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 NCAPHQ15003 741 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 AAK1Q2M2I8 961 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 TRIM60Q495X7 471 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 OLFML2BQ68BL8 750 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 RUFY4Q6ZNE9 571 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 SPATS2Q86XZ4 545 aaKnown RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 STK11IPQ8N1F8 1099 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 KLHDC4Q8TBB5 520 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 SLC7A3Q8WY07 619 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 DDX1Q92499 740 aaKnown RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 TIFAQ96CG3 184 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 NECAB3Q96P71 396 aaPredicted RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 CDC6Q99741 560 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 HERPUD2Q9BSE4 406 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 EPN3Q9H201 632 aa8.65□□□□□ -1.02
HCG20-208ENST00000439406 LUC7LQ9NQ29 371 aaKnown RBP8.65□□□□□ -1.02
HCG20-208ENST00000439406 FLRT1Q9NZU1 646 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms