RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.22
CPNE4-201ENST00000429747 CACNA1FO60840 1977 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 RIC1Q4ADV7 1423 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 SERPINB2P05120 415 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 GAP43P17677 238 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 MXRA7P84157 204 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 PDIA5Q14554 519 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 TRIP13Q15645 432 aaPredicted RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 FAM102BQ5T8I3 360 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 A0A087X0T9 212 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 RPS6KA4O75676 772 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 FAM228BP0C875 321 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 PCK1P35558 622 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 PPP2R2AP63151 447 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 WDR78Q5VTH9 848 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 TBK1Q9UHD2 729 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 RASGRF2O14827 1237 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 MMEP08473 750 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 EVX2Q03828 476 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 CCDC13Q8IYE1 715 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 PSMD1Q99460 953 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 EHD4Q9H223 541 aa13.7□□□□□ -0.22
CPNE4-201ENST00000429747 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
CPNE4-201ENST00000429747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 SLC37A4O43826 429 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ACSL3O95573 720 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TNNI1P19237 187 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 GRB10Q13322 594 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 INTS5Q6P9B9 1019 aaKnown RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 MICAL1Q8TDZ2 1067 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 CNOT10Q9H9A5 744 aaKnown RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 DBNDD1Q9H9R9 158 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ARHGAP23Q9P227 1491 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TTI1O43156 1089 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TMOD1P28289 359 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 SLC8A1P32418 973 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 PDE6CP51160 858 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ZNF131P52739 623 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TBC1D1Q86TI0 1168 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 SPATA20Q8TB22 786 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 EPN3Q9H201 632 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 TOM1O60784 492 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 EIF3BP55884 814 aaKnown RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-201ENST00000429747 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 RUNDC3BQ96NL0 473 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 ZNF577Q9BSK1 485 aa13.69□□□□□ -0.22
CPNE4-201ENST00000429747 SUN1O94901 812 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 UCHL3P15374 230 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 HOXA7P31268 230 aaPredicted RBP13.68□□□□□ -0.22
CPNE4-201ENST00000429747 SGO2Q562F6 1265 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 DCUN1D2Q6PH85 259 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 TAB3Q8N5C8 712 aaPredicted RBP13.68□□□□□ -0.22
CPNE4-201ENST00000429747 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
CPNE4-201ENST00000429747 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 BBOX1O75936 387 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 BMP3P12645 472 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 ATF2P15336 505 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 PTK2Q05397 1052 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 NFIXQ14938 502 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 C6orf163Q5TEZ5 329 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 ARMC9Q7Z3E5 817 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 ANKS1AQ92625 1134 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.22
CPNE4-201ENST00000429747 MLXIPLQ9NP71 852 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
CPNE4-201ENST00000429747 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
CPNE4-201ENST00000429747 CHUKO15111 745 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms