RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 N4BP1O75113 896 aaKnown RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 SFNP31947 248 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 STAT5BP51692 787 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 P2RX5Q93086 422 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 LXNQ9BS40 222 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 TMEM206Q9H813 350 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 ATP6V0A4Q9HBG4 840 aa10.64□□□□□ -0.71
CMSS1-201ENST00000421999 JPH1Q9HDC5 661 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-201ENST00000421999 UQCRHLA0A096LP55 91 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 IRF6O14896 467 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 TBC1D12O60347 775 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 UQCRHP07919 91 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 ABCB4P21439 1286 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 KCNA3P22001 575 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
CMSS1-201ENST00000421999 PDIA5Q14554 519 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 GTF3C2Q8WUA4 911 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-201ENST00000421999 RAD54LQ92698 747 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 DENND3A2RUS2 1198 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 TRPA1O75762 1119 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 EXOC3L4Q17RC7 722 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-201ENST00000421999 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
CMSS1-201ENST00000421999 BCCIPQ9P287 314 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■■■□ 21.9
CMSS1-201ENST00000421999 KBTBD13C9JR72 458 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 FCGRTP55899 365 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-201ENST00000421999 DYDC1Q8WWB3 177 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 CLMNQ96JQ2 1002 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 CCSER1Q9C0I3 900 aa10.63□□□□□ -0.71
CMSS1-201ENST00000421999 CTAGE9A4FU28 777 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 PABPN1LA6NDY0 278 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CTSHP09668 335 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 PSMC2P35998 433 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 POLR2FP61218 127 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 PSMC5P62195 406 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 RSRC2Q7L4I2 434 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 FAM149B1Q96BN6 582 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 DHTKD1Q96HY7 919 aaPredicted RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 NT5C1BQ96P26 610 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 TTLL3Q9Y4R7 772 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 IKBKGQ9Y6K9 419 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 VWA5AO00534 786 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CLDN3O15551 220 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 RARBP10826 455 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 ADKP55263 362 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 ZNF280AP59817 542 aaPredicted RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CNOT6LQ96LI5 555 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 P2RX7Q99572 595 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 RPF1Q9H9Y2 349 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 FSD2A1L4K1 749 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 PGK2P07205 417 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 PHKA2P46019 1235 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 NOLC1Q14978 699 aaKnown RBP eCLIP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 KCNV1Q6PIU1 500 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SLC30A10Q6XR72 485 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CHST13Q8NET6 341 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CACTINQ8WUQ7 758 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CTAGE15A4D2H0 777 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CTAGE8P0CG41 777 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 DSG3P32926 999 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CKAP4Q07065 602 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CTAGE6Q86UF2 777 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SFR1Q86XK3 245 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 CTAGE4Q8IX94 777 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SEPT1Q8WYJ6 367 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 HPS3Q969F9 1004 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 TUBGCP2Q9BSJ2 902 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 STIM2Q9P246 746 aa10.62□□□□□ -0.71
CMSS1-201ENST00000421999 SLC16A4O15374 487 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 CCNE1P24864 410 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 GCLCP48506 637 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-201ENST00000421999 HERVK_113P62684 666 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 EPHA7Q15375 998 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 METTL23Q86XA0 190 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 CYP2W1Q8TAV3 490 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 ENOX1Q8TC92 643 aaKnown RBP10.61□□□□□ -0.71
CMSS1-201ENST00000421999 CCDC114Q96M63 670 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 TAF1DQ9H5J8 278 aaPredicted RBP10.61□□□□□ -0.71
CMSS1-201ENST00000421999 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 CXCL11O14625 94 aa10.61□□□□□ -0.71
CMSS1-201ENST00000421999 IKBKBO14920 756 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms