RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 AGO4Q9HCK5 861 aaKnown RBP11.91□□□□□ -0.5
RPAIN-204ENST00000405578 TRMT13Q9NUP7 481 aaKnown RBP11.91□□□□□ -0.5
RPAIN-204ENST00000405578 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
RPAIN-204ENST00000405578 ATP6V1DQ9Y5K8 247 aa11.91□□□□□ -0.5
RPAIN-204ENST00000405578 IGLV3-22A0A075B6J6 115 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 TBX3O15119 743 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 KPNA6O60684 536 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 GAS7O60861 476 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 TDP2O95551 362 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 BMP15O95972 392 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 ARP10275 920 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 KCNA5P22460 613 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 MCM7P33993 719 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 NUCB2P80303 420 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 CALCRLQ16602 461 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 CELF3Q5SZQ8 465 aaKnown RBP11.9□□□□□ -0.5
RPAIN-204ENST00000405578 CYFIP1Q7L576 1253 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-204ENST00000405578 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 MBOAT7Q96N66 472 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 RIT2Q99578 217 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-204ENST00000405578 PKD2L1Q9P0L9 805 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
RPAIN-204ENST00000405578 NFASCO94856 1347 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 LAD1O00515 517 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 ARIH2O95376 493 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 KCNA2P16389 499 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 KRT76Q01546 638 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 LEXMQ3ZCV2 418 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-204ENST00000405578 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-204ENST00000405578 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPAIN-204ENST00000405578 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 NLRC5Q86WI3 1866 aa11.89□□□□□ -0.51
RPAIN-204ENST00000405578 MYH6P13533 1939 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 A6NJR5 290 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 MSH4O15457 936 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 DCXO43602 365 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 ATP9AO75110 1047 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 RFC2P35250 354 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SP2Q02086 613 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SP4Q02446 784 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 ARHGAP1Q07960 439 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 RESTQ13127 1097 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 ZNF174Q15697 407 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 DGKDQ16760 1214 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-204ENST00000405578 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-204ENST00000405578 AFG1LQ8WV93 481 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-204ENST00000405578 COPS5Q92905 334 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 LENG9Q96B70 501 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 TEKT3Q9BXF9 490 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 LMCD1Q9NZU5 365 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 SLC9A2Q9UBY0 812 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
RPAIN-204ENST00000405578 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SLC37A4O43826 429 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SORBS3O60504 671 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 F13A1P00488 732 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SFNP31947 248 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 KCNJ6P48051 423 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 ZNF746Q6NUN9 644 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SMAP1Q8IYB5 467 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 ETNPPLQ8TBG4 499 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SEPT1Q8WYJ6 367 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 RAB34Q9BZG1 259 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 KCNMB3Q9NPA1 279 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-204ENST00000405578 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
RPAIN-204ENST00000405578 WDR64B1ANS9 1081 aa11.86□□□□□ -0.51
RPAIN-204ENST00000405578 EDIL3O43854 480 aa11.86□□□□□ -0.51
RPAIN-204ENST00000405578 BRD1O95696 1058 aa11.86□□□□□ -0.51
RPAIN-204ENST00000405578 MMP3P08254 477 aa11.86□□□□□ -0.51
RPAIN-204ENST00000405578 MYL3P08590 195 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms