RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 XPO4Q9C0E2 1151 aaKnown RBP7.73□□□□□ -1.17
CCDC171-201ENST00000380701 PIDD1Q9HB75 910 aa7.73□□□□□ -1.17
CCDC171-201ENST00000380701 AAASQ9NRG9 546 aa7.73□□□□□ -1.17
CCDC171-201ENST00000380701 TMEM51Q9NW97 253 aa7.73□□□□□ -1.17
CCDC171-201ENST00000380701 UBN2Q6ZU65 1347 aa7.73□□□□□ -1.17
CCDC171-201ENST00000380701 hCG_1642624A0A1W2PR95 340 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ALDH1A1P00352 501 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 QARSP47897 775 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SNRPFP62306 86 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SF3B3Q15393 1217 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TWF2Q6IBS0 349 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 UNC13DQ70J99 1090 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TBC1D19Q8N5T2 526 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 XXYLT1Q8NBI6 393 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 AGBL3Q8NEM8 1001 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 GANCQ8TET4 914 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ATP6V1E2Q96A05 226 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TNIP3Q96KP6 325 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CARD6Q9BX69 1037 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TEX13BQ9BXU2 312 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TRIM31Q9BZY9 425 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 MED4Q9NPJ6 270 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 RCOR1Q9UKL0 485 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PPP2R3BQ9Y5P8 575 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 MGEA5O60502 916 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ECEL1O95672 775 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 APOEP02649 317 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SERPING1P05155 500 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CYP21A2P08686 494 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ZFXP17010 805 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 YWHAGP61981 247 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 COG2Q14746 738 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ITPRIPL1Q6GPH6 555 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 NSUN7Q8NE18 718 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ARHGEF1Q92888 912 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 EFHD1Q9BUP0 239 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PCDHA6Q9UN73 950 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PCDHA8Q9Y5H6 950 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PRDM15P57071 1507 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PGRMC1O00264 195 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CYP27B1O15528 508 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 KRT1P04264 644 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TAC1P20366 129 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 IL9RQ01113 521 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TAF1CQ15572 869 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TBC1D9BQ66K14 1250 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 JADE1Q6IE81 842 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 C4orf50Q6ZRC1 276 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 ERICH1Q86X53 443 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 KDM1AO60341 852 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CYBBP04839 570 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PFKFB3Q16875 520 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 PCGF5Q86SE9 256 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CEP120Q8N960 986 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CHST13Q8NET6 341 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 RDM1Q8NG50 284 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 HEXIM2Q96MH2 286 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 NFU1Q9UMS0 254 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 A0A1B0GUA9 196 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TBX3O15119 743 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 HPDP32754 393 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 GPSM2P81274 684 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CAV1Q03135 178 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 KRT33BQ14525 404 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 TBC1D10BQ4KMP7 808 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CC2D1AQ6P1N0 951 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 CYP26B1Q9NR63 512 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 LSM7Q9UK45 103 aaKnown RBP7.72□□□□□ -1.17
CCDC171-201ENST00000380701 SLC13A4Q9UKG4 626 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 MAD1L1Q9Y6D9 718 aa7.72□□□□□ -1.17
CCDC171-201ENST00000380701 GOLGA8JA6NMD2 632 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 FOXP2O15409 715 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 HOXA2O43364 376 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 ATP8B1O43520 1251 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 SRGAP2CP0DJJ0 459 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 IRX5P78411 483 aaPredicted RBP7.71□□□□□ -1.17
CCDC171-201ENST00000380701 EPHA7Q15375 998 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 PROSER3Q2NL68 480 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 TRMT2AQ8IZ69 625 aaKnown RBP7.71□□□□□ -1.17
CCDC171-201ENST00000380701 DNAAF3Q8N9W5 541 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 OSBPL5Q9H0X9 879 aaPredicted RBP7.71□□□□□ -1.17
CCDC171-201ENST00000380701 NYAP2Q9P242 653 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.17
CCDC171-201ENST00000380701 SCRN1Q12765 414 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 CCNYQ8ND76 341 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 OR6B3Q8NGW1 331 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 PTPRUQ92729 1446 aa7.71□□□□□ -1.17
CCDC171-201ENST00000380701 RRN3P2A6NIE6 340 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 CCDC188H7C350 402 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 STMN1P16949 149 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 SMARCA1P28370 1054 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 RFC5P40937 340 aa7.71□□□□□ -1.18
CCDC171-201ENST00000380701 RNASE9P60153 205 aaKnown RBP7.71□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF512BQ96KM6 892 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms