RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DEXIO95424 95 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 GLI1P08151 1106 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 TBC1D1Q86TI0 1168 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-203ENST00000375315 TEX9Q8N6V9 391 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 CSRNP2Q9H175 543 aa13.27□□□□□ -0.29
C9orf3-203ENST00000375315 STXBP3O00186 592 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 GNAT1P11488 350 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TMOD1P28289 359 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 HSPA9P38646 679 aaKnown RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 DPYDQ12882 1025 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF268Q14587 947 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 SEPT2Q15019 361 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 GNPTABQ3T906 1256 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CFAP221Q4G0U5 840 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 EZH1Q92800 747 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 RNF14Q9UBS8 474 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 COBLO75128 1261 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 ATP4AP20648 1035 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CCDC125Q86Z20 511 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 APLFQ8IW19 511 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 WASF1Q92558 559 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 OSBPL1AQ9BXW6 950 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 SLC12A4Q9UP95 1085 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 ADAMTSL1Q8N6G6 1762 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CXCR5P32302 372 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 DLK2Q6UY11 383 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TRIM74Q86UV6 250 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.294e-8■■■■■ 159.8
C9orf3-203ENST00000375315 PSMB7Q99436 277 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 PSMD1Q99460 953 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 DNAJC18Q9H819 358 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 SMARCAL1Q9NZC9 954 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
C9orf3-203ENST00000375315 ESYT3A0FGR9 886 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 B4DLN1 442 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 DRD4P21917 467 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 CASP1P29466 404 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 SHMT1P34896 483 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 PKN1Q16512 942 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
C9orf3-203ENST00000375315 B4GALNT2Q8NHY0 566 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 ANKRD27Q96NW4 1050 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-203ENST00000375315 CAPN6Q9Y6Q1 641 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 BACH1O14867 736 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 FGRP09769 529 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 ALADP13716 330 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 TRIM21P19474 475 aaKnown RBP13.25□□□□□ -0.29
C9orf3-203ENST00000375315 TGFB2P61812 414 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 ZNF174Q15697 407 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 AGBL2Q5U5Z8 902 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 ZFAND2BQ8WV99 257 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 NELFBQ8WX92 580 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 LRRC45Q96CN5 670 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
C9orf3-203ENST00000375315 H7C1D1 291 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 COQ9O75208 318 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 GH2P01242 217 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PARP1P09874 1014 aaKnown RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 NEDD1Q8NHV4 660 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-203ENST00000375315 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 CYTH3O43739 400 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 MOCS3O95396 460 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 JAG1P78504 1218 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 GALNT15Q8N3T1 639 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 COA7Q96BR5 231 aa13.24□□□□□ -0.29
C9orf3-203ENST00000375315 PIGSQ96S52 555 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms