RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
PFDN6-202ENST00000374607 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 LXNQ9BS40 222 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
PFDN6-202ENST00000374607 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
PFDN6-202ENST00000374607 RGL1Q9NZL6 768 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 INSRRP14616 1297 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-202ENST00000374607 CCT6AP40227 531 aaKnown RBP17.07■□□□□ 0.32
PFDN6-202ENST00000374607 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 XKR3Q5GH77 459 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 GDF6Q6KF10 455 aaPredicted RBP17.07■□□□□ 0.32
PFDN6-202ENST00000374607 OTUD6AQ7L8S5 288 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 CCDC155Q8N6L0 562 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
PFDN6-202ENST00000374607 KRT85P78386 507 aa17.06■□□□□ 0.32
PFDN6-202ENST00000374607 UGCGQ16739 394 aa17.06■□□□□ 0.32
PFDN6-202ENST00000374607 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
PFDN6-202ENST00000374607 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
PFDN6-202ENST00000374607 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
PFDN6-202ENST00000374607 CEP290O15078 2479 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 SPTLC2O15270 562 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 RAG1P15918 1043 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 TXLNAP40222 546 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 UBA7P41226 1012 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 ZNF200P98182 395 aaPredicted RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 DNM1Q05193 864 aaKnown RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 SLC39A14Q15043 492 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 RETREG2Q8NC44 543 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 AK8Q96MA6 479 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 ZMYND8Q9ULU4 1186 aaPredicted RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
PFDN6-202ENST00000374607 ZDHHC9Q9Y397 364 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 SCN10AQ9Y5Y9 1956 aa17.05■□□□□ 0.32
PFDN6-202ENST00000374607 COL1A2P08123 1366 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 TREHO43280 583 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 ZNF862O60290 1169 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 SLITRK3O94933 977 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 YEATS4O95619 227 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 CYP2C9P11712 490 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 SYN1P17600 705 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 ATP4AP20648 1035 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 YWHABP31946 246 aaKnown RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 LONP1P36776 959 aaKnown RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 NASPP49321 788 aaPredicted RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 TBC1D8BQ0IIM8 1120 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 PTK7Q13308 1070 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 BFSP2Q13515 415 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 IL17AQ16552 155 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 IGSF22Q8N9C0 903 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 KCNG4Q8TDN1 519 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 TRAPPC12Q8WVT3 735 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 CEP170P1Q96L14 293 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 HIPK3Q9H422 1215 aa17.04■□□□□ 0.32
PFDN6-202ENST00000374607 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
PFDN6-202ENST00000374607 KDM3AQ9Y4C1 1321 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 CD4P01730 458 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 KLRC1P26715 233 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 RPA1P27694 616 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 TMOD1P28289 359 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 ME1P48163 572 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 PTPAQ15257 358 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 XKR9Q5GH70 373 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 NACC1Q96RE7 527 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 PDLIM7Q9NR12 457 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 CHMP5Q9NZZ3 219 aa17.03■□□□□ 0.32
PFDN6-202ENST00000374607 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
PFDN6-202ENST00000374607 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 M0QZ92 97 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 MAGEB2O15479 319 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 MED24O75448 989 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 CDC25AP30304 524 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 THPOP40225 353 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 PLA2G4FQ68DD2 849 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 TAF2Q6P1X5 1199 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms