RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 SIP14410 1827 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 BRD1O95696 1058 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 INSRRP14616 1297 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 ATP4AP20648 1035 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 HOXC8P31273 242 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 IGBP1P78318 339 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 ZNF484Q5JVG2 852 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 HAUS3Q68CZ6 603 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 LMBR1Q8WVP7 490 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 DYDC2Q96IM9 177 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 LXNQ9BS40 222 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 CLIC4Q9Y696 253 aa20.55■□□□□ 0.88
PBX3-202ENST00000373482 ZNF862O60290 1169 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 SYN1P17600 705 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
PBX3-202ENST00000373482 PTK7Q13308 1070 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 XKR3Q5GH77 459 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 TPH2Q8IWU9 490 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 ZSWIM4Q9H7M6 989 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 TUBE1Q9UJT0 475 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 TBX21Q9UL17 535 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 ZMYND8Q9ULU4 1186 aaPredicted RBP20.54■□□□□ 0.88
PBX3-202ENST00000373482 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
PBX3-202ENST00000373482 VWA3AA6NCI4 1184 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 KIAA0355O15063 1070 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 TREHO43280 583 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 CYP2C9P11712 490 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 RAG1P15918 1043 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 NUCB2P80303 420 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 ZNF200P98182 395 aaPredicted RBP20.53■□□□□ 0.88
PBX3-202ENST00000373482 BFSP2Q13515 415 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 CTTNQ14247 550 aaKnown RBP20.53■□□□□ 0.88
PBX3-202ENST00000373482 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 SH3RF1Q7Z6J0 888 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 C4orf19Q8IY42 314 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
PBX3-202ENST00000373482 HIPK3Q9H422 1215 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 TUFT1Q9NNX1 390 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
PBX3-202ENST00000373482 SEPT9Q9UHD8 586 aaPredicted RBP20.53■□□□□ 0.88
PBX3-202ENST00000373482 TRIM43BA6NCK2 446 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 SLITRK3O94933 977 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 ADAM17P78536 824 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 HIC1Q14526 733 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 STK38Q15208 465 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 OTUD6AQ7L8S5 288 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 SERINC5Q86VE9 423 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 CAGE1Q8TC20 777 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 TRIM43Q96BQ3 446 aaPredicted RBP20.52■□□□□ 0.88
PBX3-202ENST00000373482 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
PBX3-202ENST00000373482 POLR3CQ9BUI4 534 aaPredicted RBP20.52■□□□□ 0.88
PBX3-202ENST00000373482 CEP290O15078 2479 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 TIMP1P01033 207 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 RPA1P27694 616 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 PTPAQ15257 358 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 IL17AQ16552 155 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 KRT79Q5XKE5 535 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 TAF2Q6P1X5 1199 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 RETREG2Q8NC44 543 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 AK8Q96MA6 479 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 NIFKQ9BYG3 293 aaKnown RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 PPP1R12CQ9BZL4 782 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 TFIP11Q9UBB9 837 aaKnown RBP20.51■□□□□ 0.87
PBX3-202ENST00000373482 CFAP45Q9UL16 551 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 ZDHHC9Q9Y397 364 aa20.51■□□□□ 0.87
PBX3-202ENST00000373482 MBLAC1A4D2B0 266 aaPredicted RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 RPLP2P05387 115 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 MUTP22033 750 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 KLRC1P26715 233 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 YWHABP31946 246 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 LONP1P36776 959 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 CCT6AP40227 531 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 SLC39A14Q15043 492 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 MTERF2Q49AM1 385 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 MARCH8Q5T0T0 291 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 RSPH3Q86UC2 560 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 CATSPER3Q86XQ3 398 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 SNX29Q8TEQ0 813 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 NOC4LQ9BVI4 516 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 TSHZ2Q9NRE2 1034 aa20.5■□□□□ 0.87
PBX3-202ENST00000373482 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
PBX3-202ENST00000373482 H0YGN5 161 aa20.49■□□□□ 0.87
PBX3-202ENST00000373482 MAGEB2O15479 319 aa20.49■□□□□ 0.87
PBX3-202ENST00000373482 MED24O75448 989 aa20.49■□□□□ 0.87
PBX3-202ENST00000373482 LYPLA2O95372 231 aa20.49■□□□□ 0.87
PBX3-202ENST00000373482 YEATS4O95619 227 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms