RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 BHMT2Q9H2M3 363 aa12.14□□□□□ -0.47
LCN1-202ENST00000371781 GRPEL1Q9HAV7 217 aa12.14□□□□□ -0.47
LCN1-202ENST00000371781 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 SSBP05455 408 aaKnown RBP eCLIP12.13□□□□□ -0.47
LCN1-202ENST00000371781 SMPD1P17405 629 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 MUTP22033 750 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 SFNP31947 248 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 CYP2C19P33261 490 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 PSMC4P43686 418 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 QARSP47897 775 aaKnown RBP12.13□□□□□ -0.47
LCN1-202ENST00000371781 ASIC1P78348 528 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
LCN1-202ENST00000371781 PRKCZQ05513 592 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 TRIM32Q13049 653 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 KCNB1Q14721 858 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 RINT1Q6NUQ1 792 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 FBXO46Q6PJ61 603 aaPredicted RBP12.13□□□□□ -0.47
LCN1-202ENST00000371781 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 ANO5Q75V66 913 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 C4orf19Q8IY42 314 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 SMAP1Q8IYB5 467 aaPredicted RBP12.13□□□□□ -0.47
LCN1-202ENST00000371781 TRIML1Q8N9V2 468 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 FAM200AQ8TCP9 573 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 TRIB2Q92519 343 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 GSDMAQ96QA5 445 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 CEP89Q96ST8 783 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 GPR20Q99678 358 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 SH2D3AQ9BRG2 576 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 GABBR1Q9UBS5 961 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
LCN1-202ENST00000371781 MYH9P35579 1960 aaKnown RBP12.12□□□□□ -0.47
LCN1-202ENST00000371781 BRCA2P51587 3418 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 LGR5O75473 907 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 SMC2O95347 1197 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 MYL1P05976 194 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
LCN1-202ENST00000371781 TGFB3P10600 412 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
LCN1-202ENST00000371781 RGS2P41220 211 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 RARRES1P49788 294 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 NPEPPSP55786 919 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 PSMC5P62195 406 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 PRKCEQ02156 737 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 STK4Q13043 487 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 COASYQ13057 564 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 GIT2Q14161 759 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 OLFML2BQ68BL8 750 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 SWSAP1Q6NVH7 229 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
LCN1-202ENST00000371781 CD99L2Q8TCZ2 262 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 ZSWIM4Q9H7M6 989 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
LCN1-202ENST00000371781 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
LCN1-202ENST00000371781 B4DLN1 442 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 FKTNO75072 461 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 FLT3LGP49771 235 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 ZNF165P49910 485 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 FCGRTP55899 365 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 NEDD9Q14511 834 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 MSL3Q8N5Y2 521 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 BPIFA3Q9BQP9 254 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
LCN1-202ENST00000371781 SIP14410 1827 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
LCN1-202ENST00000371781 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
LCN1-202ENST00000371781 PSAPP07602 524 aa12.1□□□□□ -0.47
LCN1-202ENST00000371781 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
LCN1-202ENST00000371781 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
LCN1-202ENST00000371781 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
LCN1-202ENST00000371781 PRCPP42785 496 aa12.1□□□□□ -0.47
LCN1-202ENST00000371781 CASP5P51878 434 aa12.1□□□□□ -0.47
LCN1-202ENST00000371781 PMS1P54277 932 aaKnown RBP12.1□□□□□ -0.47
LCN1-202ENST00000371781 SP3Q02447 781 aa12.1□□□□□ -0.47
LCN1-202ENST00000371781 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms