RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 Q8TCH9 128 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 AJUBAQ96IF1 538 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 ZFYVE21Q9BQ24 234 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 TACO1Q9BSH4 297 aaKnown RBP4.89□□□□□ -1.63
LRRC39-203ENST00000370138 ZNF747Q9BV97 191 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 SLC39A2Q9NP94 309 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 FEZ2Q9UHY8 353 aaPredicted RBP4.89□□□□□ -1.63
LRRC39-203ENST00000370138 SH3BP1Q9Y3L3 701 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 SLC4A7Q9Y6M7 1214 aa4.89□□□□□ -1.63
LRRC39-203ENST00000370138 TRAV20A0A0B4J274 112 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 CCER2I3L3R5 266 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SLPIP03973 132 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 CHGBP05060 677 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 ZNF888P0CJ79 500 aaPredicted RBP4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SELENOPP49908 381 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SPDYAQ5MJ70 313 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 MKL1Q969V6 931 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SORCS2Q96PQ0 1159 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 TSPAN18Q96SJ8 248 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
LRRC39-203ENST00000370138 KATNBL1Q9H079 304 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SLC52A1Q9NWF4 448 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SRRDQ9UH36 339 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 EXOC5O00471 708 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 FOXS1O43638 330 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 AMHP03971 560 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 CCDC181Q5TID7 509 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 TCTN3Q6NUS6 607 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SPATC1Q76KD6 591 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 SMC5Q8IY18 1101 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 LRRC37BQ96QE4 947 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 VPS11Q9H270 941 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 TCAF1Q9Y4C2 921 aa4.88□□□□□ -1.63
LRRC39-203ENST00000370138 ZCCHC6Q5VYS8 1495 aaKnown RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 FAM90A27PA6NNH2 459 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 H0Y858 1186 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 TCERG1O14776 1098 aaKnown RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 MUSKO15146 869 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 GTF2F1P35269 517 aaKnown RBP eCLIP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 ACVRL1P37023 503 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 FOXD4Q12950 439 aaPredicted RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 HSP90AB3PQ58FF7 597 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 EGFL6Q8IUX8 553 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 ZFPM1Q8IX07 1006 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 LRRC47Q8N1G4 583 aaKnown RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 SREK1Q8WXA9 508 aaKnown RBP4.87□□□□□ -1.63
LRRC39-203ENST00000370138 LMF1Q96S06 567 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 ALG1Q9BT22 464 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 TRIM55Q9BYV6 548 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 SEC61A2Q9H9S3 476 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 PRDM4Q9UKN5 801 aa4.87□□□□□ -1.63
LRRC39-203ENST00000370138 DCAF1Q9Y4B6 1507 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 ADCY3O60266 1144 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 DBPQ10586 325 aaPredicted RBP4.86□□□□□ -1.63
LRRC39-203ENST00000370138 FOXB2Q5VYV0 432 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 ARMC5Q96C12 935 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 SPATA9Q9BWV2 254 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 WDR26Q9H7D7 661 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 PPP1R1BQ9UD71 204 aaPredicted RBP4.86□□□□□ -1.63
LRRC39-203ENST00000370138 CCDC180Q9P1Z9 1646 aa4.86□□□□□ -1.63
LRRC39-203ENST00000370138 ESYT3A0FGR9 886 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 PPFIA4O75335 1185 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 EIF3JO75822 258 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 AMY2AP04746 511 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 PTPN1P18031 435 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 AMY2BP19961 511 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 GDF5P43026 501 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 USP10Q14694 798 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 BTBD8Q5XKL5 378 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 TAX1BP1Q86VP1 789 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 REXO1L1PQ8IX06 675 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 MSL3Q8N5Y2 521 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 NEIL1Q96FI4 390 aaPredicted RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 METTL14Q9HCE5 456 aaKnown RBP4.85□□□□□ -1.63
LRRC39-203ENST00000370138 SRPK3Q9UPE1 567 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 MSRB2Q9Y3D2 182 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 PCDHA8Q9Y5H6 950 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 RPS6KL1Q9Y6S9 549 aa4.85□□□□□ -1.63
LRRC39-203ENST00000370138 MAN2B1O00754 1011 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 U2SURPO15042 1029 aaKnown RBP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 CREB3O43889 395 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 SH3BP5O60239 455 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 RAB11FIP3O75154 756 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 C6orf222P0C671 652 aaPredicted RBP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 SSR1P43307 286 aaKnown RBP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 PAK1Q13153 545 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 NOLC1Q14978 699 aaKnown RBP eCLIP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 FAM209AQ5JX71 171 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 TAF3Q5VWG9 929 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 NBPF6Q5VWK0 638 aa4.84□□□□□ -1.63
LRRC39-203ENST00000370138 PTRH1Q86Y79 214 aaKnown RBP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.84□□□□□ -1.63
LRRC39-203ENST00000370138 IFNL2Q8IZJ0 200 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms