RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 POTEEQ6S8J3 1075 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 UNC13DQ70J99 1090 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 MRPL47Q9HD33 250 aaKnown RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 TACC3Q9Y6A5 838 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 IPO5O00410 1097 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ZNF568Q3ZCX4 644 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ZNF667Q5HYK9 610 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ANKRD20A3Q5VUR7 823 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 B4GALNT4Q76KP1 1039 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 CLEC10AQ8IUN9 316 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 SMAP1Q8IYB5 467 aaPredicted RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 SLITRK6Q9H5Y7 841 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ATP8B3O60423 1300 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PFDN6O15212 129 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 TDP2O95551 362 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PHKA2P46019 1235 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 CABS1Q96KC9 395 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 DENND3A2RUS2 1198 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ORC4O43929 436 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 LDHAP00338 332 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ZNF18P17022 549 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 OAS2P29728 719 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 RPS6KA2Q15349 733 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 FASTKD5Q7L8L6 764 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PSPC1Q8WXF1 523 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ARHGEF2Q92974 986 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PPP1R13BQ96KQ4 1090 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ATP1A3P13637 1013 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 TCP11X2Q5H9J9 407 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 ANGEL2Q5VTE6 544 aaKnown RBP20.09■□□□□ 0.81
CLIP2-202ENST00000361545 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
CLIP2-202ENST00000361545 SOWAHDA6NJG2 315 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 CXCR5P32302 372 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.81
CLIP2-202ENST00000361545 KCTD6Q8NC69 237 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 MTRQ99707 1265 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 ZBED6P86452 979 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 CYP27A1Q02318 531 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 CDO1Q16878 200 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 PPP4R1Q8TF05 950 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 FAM213AQ9BRX8 229 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 ANAPC5Q9UJX4 755 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 FLT1P17948 1338 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.81
CLIP2-202ENST00000361545 LAMC1P11047 1609 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 TNPO2O14787 897 aaKnown RBP20.08■□□□□ 0.8
CLIP2-202ENST00000361545 BNIP3LO60238 219 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 PPFIBP2Q8ND30 876 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 RAD54LQ92698 747 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 NHEJ1Q9H9Q4 299 aaPredicted RBP20.08■□□□□ 0.8
CLIP2-202ENST00000361545 TOPORSQ9NS56 1045 aaPredicted RBP20.08■□□□□ 0.8
CLIP2-202ENST00000361545 LRRD1A4D1F6 860 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 TRIM49BA6NDI0 452 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 PP2D1A8MPX8 630 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 MOCS3O95396 460 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 HOXD10P28358 340 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 SGO2Q562F6 1265 aa20.08■□□□□ 0.8
CLIP2-202ENST00000361545 ESYT2A0FGR8 921 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 PRPSAP2O60256 369 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
CLIP2-202ENST00000361545 GSTA1P08263 222 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 GSTA2P09210 222 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 DPEP1P16444 411 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 KRT31Q15323 416 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 E9PCH4 1651 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 NTSR2O95665 410 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 EZH2Q15910 746 aaKnown RBP20.07■□□□□ 0.8
CLIP2-202ENST00000361545 MFSD14CQ5VZR4 134 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 BBOF1Q8ND07 529 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 GCLMP48507 274 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 SMYD2Q9NRG4 433 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 POC1B-GALNT4F8VUJ3 575 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 PSMD14O00487 310 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 BRD3Q15059 726 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 NXNQ6DKJ4 435 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 DNAAF3Q8N9W5 541 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 GGA3Q9NZ52 723 aa20.07■□□□□ 0.8
CLIP2-202ENST00000361545 IPO11Q9UI26 975 aaKnown RBP20.07■□□□□ 0.8
CLIP2-202ENST00000361545 CHGBP05060 677 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 ECE1P42892 770 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 CDC42EP5Q6NZY7 148 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 LXNQ9BS40 222 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 RFX7Q2KHR2 1363 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 ARHGEF40Q8TER5 1519 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 EFCAB8A8MWE9 144 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 MCF2LO15068 1137 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 SFNP31947 248 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 CDKL2Q92772 493 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 ZBBXA8MT70 800 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 SERPING1P05155 500 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 MUM1L1Q5H9M0 696 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 ZNF70Q9UC06 446 aaPredicted RBP20.06■□□□□ 0.8
CLIP2-202ENST00000361545 RCAN1P53805 252 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 LMNB2Q03252 620 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 XXYLT1Q8NBI6 393 aa20.06■□□□□ 0.8
CLIP2-202ENST00000361545 ADAMTS1Q9UHI8 967 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms