RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.21
DFFB-202ENST00000339350 NDNQ99608 321 aa13.71□□□□□ -0.21
DFFB-202ENST00000339350 VAT1LQ9HCJ6 419 aa13.71□□□□□ -0.21
DFFB-202ENST00000339350 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
DFFB-202ENST00000339350 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.21
DFFB-202ENST00000339350 A8MUI8 341 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 BPIFB4P59827 614 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 SLC35G1Q2M3R5 365 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 CCDC38Q502W7 563 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 TEX9Q8N6V9 391 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 PNMA1Q8ND90 353 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 TAF4BQ92750 862 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 ITM2BQ9Y287 266 aa13.71□□□□□ -0.22
DFFB-202ENST00000339350 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 TMOD1P28289 359 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
DFFB-202ENST00000339350 RFC5P40937 340 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 KRT83P78385 493 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
DFFB-202ENST00000339350 CCDC80Q76M96 950 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
DFFB-202ENST00000339350 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 hCG_2014768A0A024R1R8 64 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 GHRP10912 638 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 TECP42680 631 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 DNM2P50570 870 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 RNASE9P60153 205 aaKnown RBP13.7□□□□□ -0.22
DFFB-202ENST00000339350 KIF5AQ12840 1032 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
DFFB-202ENST00000339350 CFAP58Q5T655 872 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 DYMQ7RTS9 669 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 NEK9Q8TD19 979 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 CCDC42Q96M95 316 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
DFFB-202ENST00000339350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
DFFB-202ENST00000339350 PHF20L1A8MW92 1017 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 BUB1O43683 1085 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 SRGNP10124 158 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CCND1P24385 295 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 EPHB4P54760 987 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 KCNJ2P63252 427 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CKAP4Q07065 602 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 PUS10Q3MIT2 529 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 DPY19L2Q6NUT2 758 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 ATXN10Q9UBB4 475 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CYTH3O43739 400 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 ATP2A2P16615 1042 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 PCK1P35558 622 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 FAM133BQ5BKY9 247 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 GKAP1Q5VSY0 366 aaPredicted RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 KIFAP3Q92845 792 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 FGD4Q96M96 766 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 UBA5Q9GZZ9 404 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 THRAP3Q9Y2W1 955 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 TRAPPC3O43617 180 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 GFPT2O94808 682 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 TRIM37O94972 964 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CPLX4Q7Z7G2 160 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CABP7Q86V35 215 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 LCA5Q86VQ0 697 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 P2RX5Q93086 422 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 ATP6V1G3Q96LB4 118 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
DFFB-202ENST00000339350 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
DFFB-202ENST00000339350 FAM170AA1A519 330 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 PFDN1O60925 122 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 KRT38O76015 456 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 TRAPPC10P48553 1259 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ALDH5A1P51649 535 aaPredicted RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 MRPS35P82673 323 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms