RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
DFFB-202ENST00000339350 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
DFFB-202ENST00000339350 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
DFFB-202ENST00000339350 MYT1Q01538 1121 aa21.36■■□□□ 1.01
DFFB-202ENST00000339350 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
DFFB-202ENST00000339350 DCAF8L2P0C7V8 631 aa21.26■□□□□ 0.99
DFFB-202ENST00000339350 HRCP23327 699 aa21.14■□□□□ 0.97
DFFB-202ENST00000339350 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
DFFB-202ENST00000339350 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
DFFB-202ENST00000339350 ZCCHC6Q5VYS8 1495 aaKnown RBP20.8■□□□□ 0.92
DFFB-202ENST00000339350 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
DFFB-202ENST00000339350 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
DFFB-202ENST00000339350 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
DFFB-202ENST00000339350 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
DFFB-202ENST00000339350 TTBK1Q5TCY1 1321 aaPredicted RBP20.41■□□□□ 0.86
DFFB-202ENST00000339350 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
DFFB-202ENST00000339350 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
DFFB-202ENST00000339350 ABCC9O60706 1549 aa20.18■□□□□ 0.82
DFFB-202ENST00000339350 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
DFFB-202ENST00000339350 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
DFFB-202ENST00000339350 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
DFFB-202ENST00000339350 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
DFFB-202ENST00000339350 ACIN1Q9UKV3 1341 aaKnown RBP19.74■□□□□ 0.75
DFFB-202ENST00000339350 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
DFFB-202ENST00000339350 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
DFFB-202ENST00000339350 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
DFFB-202ENST00000339350 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
DFFB-202ENST00000339350 ERICH6Q7L0X2 663 aa19.68■□□□□ 0.74
DFFB-202ENST00000339350 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
DFFB-202ENST00000339350 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
DFFB-202ENST00000339350 APLP2Q06481 763 aa19.54■□□□□ 0.72
DFFB-202ENST00000339350 NACADO15069 1562 aa19.53■□□□□ 0.72
DFFB-202ENST00000339350 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
DFFB-202ENST00000339350 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
DFFB-202ENST00000339350 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
DFFB-202ENST00000339350 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
DFFB-202ENST00000339350 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
DFFB-202ENST00000339350 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
DFFB-202ENST00000339350 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
DFFB-202ENST00000339350 WIZO95785 1651 aa19.22■□□□□ 0.67
DFFB-202ENST00000339350 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
DFFB-202ENST00000339350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
DFFB-202ENST00000339350 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
DFFB-202ENST00000339350 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
DFFB-202ENST00000339350 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
DFFB-202ENST00000339350 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
DFFB-202ENST00000339350 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
DFFB-202ENST00000339350 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
DFFB-202ENST00000339350 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
DFFB-202ENST00000339350 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
DFFB-202ENST00000339350 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
DFFB-202ENST00000339350 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
DFFB-202ENST00000339350 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
DFFB-202ENST00000339350 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
DFFB-202ENST00000339350 SOGA1O94964 1423 aa18.71■□□□□ 0.58
DFFB-202ENST00000339350 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
DFFB-202ENST00000339350 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
DFFB-202ENST00000339350 CEP162Q5TB80 1403 aa18.68■□□□□ 0.58
DFFB-202ENST00000339350 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
DFFB-202ENST00000339350 RUSC2Q8N2Y8 1516 aa18.65■□□□□ 0.58
DFFB-202ENST00000339350 EIF5BO60841 1220 aaKnown RBP18.6■□□□□ 0.57
DFFB-202ENST00000339350 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
DFFB-202ENST00000339350 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
DFFB-202ENST00000339350 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
DFFB-202ENST00000339350 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.55
DFFB-202ENST00000339350 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
DFFB-202ENST00000339350 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
DFFB-202ENST00000339350 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
DFFB-202ENST00000339350 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
DFFB-202ENST00000339350 SUPT16HQ9Y5B9 1047 aaKnown RBP18.47■□□□□ 0.55
DFFB-202ENST00000339350 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
DFFB-202ENST00000339350 MIER1Q8N108 512 aa18.38■□□□□ 0.53
DFFB-202ENST00000339350 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
DFFB-202ENST00000339350 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
DFFB-202ENST00000339350 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
DFFB-202ENST00000339350 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
DFFB-202ENST00000339350 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
DFFB-202ENST00000339350 EEA1Q15075 1411 aa18.3■□□□□ 0.52
DFFB-202ENST00000339350 CLIP1P30622 1438 aa18.26■□□□□ 0.51
DFFB-202ENST00000339350 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
DFFB-202ENST00000339350 CCDC136Q96JN2 1154 aa18.22■□□□□ 0.51
DFFB-202ENST00000339350 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
DFFB-202ENST00000339350 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
DFFB-202ENST00000339350 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
DFFB-202ENST00000339350 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
DFFB-202ENST00000339350 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
DFFB-202ENST00000339350 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
DFFB-202ENST00000339350 MSH5O43196 834 aa18.1■□□□□ 0.49
DFFB-202ENST00000339350 KIF21BO75037 1637 aa18.09■□□□□ 0.49
DFFB-202ENST00000339350 BCANQ96GW7 911 aa18.08■□□□□ 0.48
DFFB-202ENST00000339350 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
DFFB-202ENST00000339350 DEKP35659 375 aaKnown RBP18.05■□□□□ 0.48
DFFB-202ENST00000339350 ITGAEP38570 1179 aa18.05■□□□□ 0.48
DFFB-202ENST00000339350 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
DFFB-202ENST00000339350 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
DFFB-202ENST00000339350 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
DFFB-202ENST00000339350 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
DFFB-202ENST00000339350 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
DFFB-202ENST00000339350 CUX1P39880 1505 aa17.98■□□□□ 0.47
DFFB-202ENST00000339350 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms