RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CATSPER3Q86XQ3 398 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 DNAAF5Q86Y56 855 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 RGL1Q9NZL6 768 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CAPN6Q9Y6Q1 641 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 COL11A2P13942 1736 aaPredicted RBP15.22■□□□□ 0.03
SF1-202ENST00000334944 RSPH10B2B2RC85 870 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 ZBTB39O15060 712 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 MOCS3O95396 460 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 RSPH10BP0C881 870 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 CYP11B2P19099 503 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 GCKP35557 465 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 KRT83P78385 493 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 ARSHQ5FYA8 562 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 NAA35Q5VZE5 725 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 PPP1R18Q6NYC8 613 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 RNPC3Q96LT9 517 aaKnown RBP15.22■□□□□ 0.03
SF1-202ENST00000334944 NUP58Q9BVL2 599 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 IFIH1Q9BYX4 1025 aaKnown RBP15.22■□□□□ 0.03
SF1-202ENST00000334944 KIF9Q9HAQ2 790 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 A1CFQ9NQ94 594 aaKnown RBP15.22■□□□□ 0.03
SF1-202ENST00000334944 HAUS2Q9NVX0 235 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 SAR1BQ9Y6B6 198 aa15.22■□□□□ 0.03
SF1-202ENST00000334944 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 KRT86O43790 486 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 SPA17Q15506 151 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 TDRD12Q587J7 1177 aaKnown RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 B4GALNT4Q76KP1 1039 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 TSG101Q99816 390 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 SH3GL2Q99962 352 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 DHX36Q9H2U1 1008 aaKnown RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 SPDYE3A6NKU9 549 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 CFBP00751 764 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 KIF11P52732 1056 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 EHHADHQ08426 723 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 ACCSLQ4AC99 568 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 TRMT1LQ7Z2T5 733 aaKnown RBP15.21■□□□□ 0.03
SF1-202ENST00000334944 TRAPPC11Q7Z392 1133 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 SCFD1Q8WVM8 642 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 NYAP2Q9P242 653 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 SLX4Q8IY92 1834 aa15.21■□□□□ 0.03
SF1-202ENST00000334944 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 KIF5AQ12840 1032 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 ORC2Q13416 577 aaPredicted RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 RUFY1Q96T51 708 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 MYH10P35580 1976 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 ENO4A6NNW6 628 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 NCK2O43639 380 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 BUB1O43683 1085 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 POLD1P28340 1107 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 ZNF76P36508 570 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 NAP1L1P55209 391 aaKnown RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 POLR2FP61218 127 aaKnown RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 KCNA1Q09470 495 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 SEMA3FQ13275 785 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 TMEM179Q6ZVK1 233 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 SALL4Q9UJQ4 1053 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 LRRC63Q05C16 580 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 ARMC3Q5W041 872 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 RETREG2Q8NC44 543 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 LRRC1Q9BTT6 524 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 PPANQ9NQ55 473 aaKnown RBP15.2■□□□□ 0.02
SF1-202ENST00000334944 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 PCDHA13Q9Y5I0 950 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
SF1-202ENST00000334944 PSMD14O00487 310 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 AP1G2O75843 785 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 TUBBP07437 444 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 BMP3P12645 472 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
SF1-202ENST00000334944 PTPROQ16827 1216 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
SF1-202ENST00000334944 DCAF4Q8WV16 495 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
SF1-202ENST00000334944 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 PKD2L1Q9P0L9 805 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 TPX2Q9ULW0 747 aaKnown RBP15.19■□□□□ 0.02
SF1-202ENST00000334944 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 EML1O00423 815 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 RASSF9O75901 435 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 UPP2O95045 317 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 ACTN1P12814 892 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 LSP1P33241 339 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 RASSF7Q02833 373 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 TUBB2AQ13885 445 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms