RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 MXI1P50539 228 aa17.34■□□□□ 0.37
ARHGEF28-201ENST00000296794 OSBPL9Q96SU4 736 aa17.34■□□□□ 0.37
ARHGEF28-201ENST00000296794 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
ARHGEF28-201ENST00000296794 EFCC1Q9HA90 598 aa17.34■□□□□ 0.37
ARHGEF28-201ENST00000296794 PP2D1A8MPX8 630 aa17.33■□□□□ 0.37
ARHGEF28-201ENST00000296794 GH2P01242 217 aa17.33■□□□□ 0.37
ARHGEF28-201ENST00000296794 PRDX5P30044 214 aa17.33■□□□□ 0.37
ARHGEF28-201ENST00000296794 CDHR2Q9BYE9 1310 aa17.33■□□□□ 0.37
ARHGEF28-201ENST00000296794 INHBAP08476 426 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 CCND2P30279 289 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 TRIP13Q15645 432 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 NCK2O43639 380 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 ECE2O60344 883 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 BCAP29Q9UHQ4 241 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 H7C0C1 242 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 ABL1P00519 1130 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 PEX19P40855 299 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 ATP5OP48047 213 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 SLC12A2P55011 1212 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 SEPT6Q14141 434 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 VPS72Q15906 364 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 PROM2Q8N271 834 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 MAD1L1Q9Y6D9 718 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 TAF6LQ9Y6J9 622 aa17.33■□□□□ 0.36
ARHGEF28-201ENST00000296794 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 ATP1A1P05023 1023 aaKnown RBP17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 PVALEFA0A1B0GWK0 134 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 EVI5O60447 810 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 BIRC2Q13490 618 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 EEPD1Q7L9B9 569 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 CACNB3P54284 484 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 VSNL1P62760 191 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 PPP2R5CQ13362 524 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 KMT5AQ9NQR1 393 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 ESYT3A0FGR9 886 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 GIPC1O14908 333 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 TRIM50Q86XT4 487 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 GDAP1Q8TB36 358 aa17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
ARHGEF28-201ENST00000296794 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 IRX4P78413 519 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 NFIXQ14938 502 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 C6orf118Q5T5N4 469 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 TLR3O15455 904 aaKnown RBP17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 CTTNQ14247 550 aaKnown RBP17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 RAD54LQ92698 747 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 A0A1W2PQC6 194 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 USP17L5A8MUK1 530 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 GABPAQ06546 454 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 FAM83BQ5T0W9 1011 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 SCYL3Q8IZE3 742 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 A0A1B0GTH6 734 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 ADCY2Q08462 1091 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 Q3C1V9 767 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 RFX6Q8HWS3 928 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 RHOT2Q8IXI1 618 aa17.31■□□□□ 0.36
ARHGEF28-201ENST00000296794 MMS22LQ6ZRQ5 1243 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 FBXO40Q9UH90 709 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 CPDO75976 1380 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 SFI1A8K8P3 1242 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 OPHN1O60890 802 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 KRT1P04264 644 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 HOXA13P31271 388 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 WRNIP1Q96S55 665 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 PFDN4Q9NQP4 134 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 SNX24Q9Y343 169 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 ZNF277Q9NRM2 450 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 HOXC10Q9NYD6 342 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 LRFN2Q9ULH4 789 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 ACSL3O95573 720 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 COG1Q8WTW3 980 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 DNAJC12Q9UKB3 198 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 ZHX2Q9Y6X8 837 aa17.3■□□□□ 0.36
ARHGEF28-201ENST00000296794 CTIFO43310 598 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 COASYQ13057 564 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 DNAJC17Q9NVM6 304 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 ZSCAN20P17040 1043 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 KCNH2Q12809 1159 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 NXNQ6DKJ4 435 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms