RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SPATA4Q8NEY3 305 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 TBC1D5Q92609 795 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 SYT17Q9BSW7 474 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 TLR10Q9BXR5 811 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 GANQ9H2C0 597 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 VAV3Q9UKW4 847 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 MYBP10242 640 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 CIITAP33076 1130 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 HNRNPH2P55795 449 aaKnown RBP16.57■□□□□ 0.24
CCDC116-201ENST00000292779 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
CCDC116-201ENST00000292779 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 EPM2AIP1Q7L775 607 aaPredicted RBP16.57■□□□□ 0.24
CCDC116-201ENST00000292779 FAM133AQ8N9E0 248 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 HDAC7Q8WUI4 952 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 LRRC1Q9BTT6 524 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 RSPH10B2B2RC85 870 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 PRPF6O94906 941 aaKnown RBP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 EGFRP00533 1210 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 ENOX2Q16206 610 aaKnown RBP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 BTNL9Q6UXG8 535 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 POLD4Q9HCU8 107 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 MED4Q9NPJ6 270 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 EML1O00423 815 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 ACTN1P12814 892 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 ZNF76P36508 570 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 AARSP49588 968 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 KLHL30Q0D2K2 578 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 CCDC181Q5TID7 509 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 SELENOOQ9BVL4 669 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 BCAS3Q9H6U6 928 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
CCDC116-201ENST00000292779 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
CCDC116-201ENST00000292779 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
CCDC116-201ENST00000292779 A0A087X0T9 212 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 FAM228BP0C875 321 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 MRPS25P82663 173 aaKnown RBP16.55■□□□□ 0.24
CCDC116-201ENST00000292779 ASIC2Q16515 512 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
CCDC116-201ENST00000292779 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 LUC7LQ9NQ29 371 aaKnown RBP16.55■□□□□ 0.24
CCDC116-201ENST00000292779 RGL1Q9NZL6 768 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 ADAMTS1Q9UHI8 967 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
CCDC116-201ENST00000292779 STK24Q9Y6E0 443 aa16.55■□□□□ 0.24
CCDC116-201ENST00000292779 SYF2O95926 243 aaKnown RBP16.54■□□□□ 0.24
CCDC116-201ENST00000292779 CYP3A4P08684 503 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 SLC9A1P19634 815 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 KLRC1P26715 233 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 STAT2P52630 851 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 NAB2Q15742 525 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 PDXKO00764 312 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
CCDC116-201ENST00000292779 PALMO75781 387 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
CCDC116-201ENST00000292779 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 SLC30A10Q6XR72 485 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 ACER1Q8TDN7 264 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 POLR3CQ9BUI4 534 aaPredicted RBP16.54■□□□□ 0.24
CCDC116-201ENST00000292779 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
CCDC116-201ENST00000292779 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
CCDC116-201ENST00000292779 ZNF541Q9H0D2 1346 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 IGLV3-22A0A075B6J6 115 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 AKAP3O75969 853 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 EYA4O95677 639 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 PAFAH1B1P43034 410 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 AENQ8WTP8 325 aaKnown RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 MS4A14Q96JA4 679 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 PACSIN1Q9BY11 444 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 ASTN1O14525 1302 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 RNF40O75150 1001 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 TBCAO75347 108 aaKnown RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 GCNT3O95395 438 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 XRCC5P13010 732 aaKnown RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 DCAF17Q5H9S7 520 aaPredicted RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms