RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FRMD5Q7Z6J6 570 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 TAX1BP1Q86VP1 789 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 USP38Q8NB14 1042 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 SGSM3Q96HU1 749 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 SMARCAL1Q9NZC9 954 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 POTEMA6NI47 508 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 GOLGA6L10A6NI86 522 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 NCK2O43639 380 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 PALMO75781 387 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 GFPT2O94808 682 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 FAM153BP0C7A2 387 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 FAM153CQ494X1 144 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 FUKQ8N0W3 1084 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 SCFD2Q8WU76 684 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 CUL5Q93034 780 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 LSM14BQ9BX40 385 aaKnown RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 EPB41L5Q9HCM4 733 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 KCNMB3Q9NPA1 279 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 EHD2Q9NZN4 543 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 DDX25Q9UHL0 483 aaKnown RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 FAM153AQ9UHL3 310 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 TRAF3IP3Q9Y228 551 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 SLC8A1P32418 973 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 USP11P51784 963 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 GUCY2DQ02846 1103 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 NFIXQ14938 502 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 ECM1Q16610 540 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 CEP57Q86XR8 500 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 IFT81Q8WYA0 676 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 PSMB7Q99436 277 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 CPVLQ9H3G5 476 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 ANKIB1Q9P2G1 1089 aa11.34□□□□□ -0.59
SKA1-201ENST00000285116 DDX20Q9UHI6 824 aaKnown RBP11.34□□□□□ -0.59
SKA1-201ENST00000285116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA1-201ENST00000285116 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 TRAF5O00463 557 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 PPP1R12AO14974 1030 aaPredicted RBP11.33□□□□□ -0.6
SKA1-201ENST00000285116 CHRNA5P30532 468 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 NPEPPSP55786 919 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 ASIC2Q16515 512 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 BMT2Q1RMZ1 405 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 SLFN11Q7Z7L1 901 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 FMNL3Q8IVF7 1028 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 LRRC57Q8N9N7 239 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 DAAM1Q9Y4D1 1078 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 KLRC1P26715 233 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 TDRD12Q587J7 1177 aaKnown RBP11.33□□□□□ -0.6
SKA1-201ENST00000285116 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
SKA1-201ENST00000285116 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 CASKIN2Q8WXE0 1202 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 SEC14L1Q92503 715 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 P3H4Q92791 437 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
SKA1-201ENST00000285116 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
SKA1-201ENST00000285116 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 TBX3O15119 743 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 POLR2FP61218 127 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 R3HDM1Q15032 1099 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 NFIL3Q16649 462 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 ANKRD20A8PQ5CZ79 823 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 IRF2BP2Q7Z5L9 587 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 GLIS3Q8NEA6 775 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 PPANQ9NQ55 473 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 SIPA1L1O43166 1804 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 LOXHD1Q8IVV2 1947 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 A0A087X0T9 212 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 CCDC188H7C350 402 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 SLC16A3O15427 465 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 TTLL1O95922 423 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 FAM228BP0C875 321 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 CYP11B2P19099 503 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 CALRP27797 417 aaKnown RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 GUCY2FP51841 1108 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 LACTB2Q53H82 288 aaPredicted RBP11.32□□□□□ -0.6
SKA1-201ENST00000285116 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
SKA1-201ENST00000285116 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms