RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Bpifa6Q0VGU8 367 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Zscan4fQ3URS2 506 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Ttbk2Q3UVR3 1243 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Vmn1r209Q5NC97 312 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 ItgaeQ60677 1167 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Ptger2Q62053 362 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Tbc1d30Q69ZT9 766 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Atp11bQ6DFW5 1175 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gm21985Q6P6P5 1106 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Smarcc2Q6PDG5 1213 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Tekt3Q6X6Z7 490 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Tex2Q6ZPJ0 1128 aaKnown RBP9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Pdcl2Q78Y63 240 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Znf365Q8BG89 408 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Shc2Q8BMC3 573 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 AidaQ8C4Q6 305 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Lmbrd2Q8C561 694 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Ccdc158Q8CDI6 1109 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Dnajc14Q921R4 703 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Tas1r1Q99PG6 842 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Appbp2Q9DAX9 585 aa9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Usp42B2RQC2 1324 aaKnown RBP9.79□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Spag17Q5S003 2320 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Igkv18-36A0A075B5M9 114 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Rab11fip2G3XA57 512 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gm7138L7N2C3 230 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Cyp2d34L7N463 504 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Cd22P35329 862 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Syt2P46097 422 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Defa-rs7P50715 91 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Tatdn3Q3U1C6 294 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Esyt1Q3U7R1 1092 aaKnown RBP9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 OcrlQ6NVF0 900 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gja6Q6S5G4 283 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Trim56Q80VI1 734 aaKnown RBP9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Rusc1Q8BG26 893 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Me3Q8BMF3 604 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Kdm4aQ8BW72 1064 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Usp20Q8C6M1 916 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Celf3Q8CIN6 465 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Fam161aQ8QZV6 448 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Oit3Q8R4V5 546 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Rbm12Q8R4X3 992 aaKnown RBP9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Ddx41Q91VN6 622 aaKnown RBP9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gtf2a1Q99PM3 378 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Serpinb3bQ9D1Q5 387 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Phf6Q9D4J7 364 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Actn2Q9JI91 894 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Ascl3Q9JJR7 174 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Igbp1bQ9QZ29 343 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gm28036V9GXJ1 658 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Gm3238W4VSP7 230 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Wdr81Q5ND34 1934 aa9.78□□□□□ -0.84
Pdlim5-209ENSMUST00000196908 Dmxl1Q6PNC0 3013 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Gcnt4E9Q649 455 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 PtmaP26350 111 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Cyp17a1P27786 507 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Ftl1P29391 183 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 CebpaP53566 359 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Usp13Q5BKP2 858 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nr2e1Q64104 385 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nrg1Q6DR99 700 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Ccdc66Q6NS45 935 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Arrdc3Q7TPQ9 414 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Zscan22Q8BGS5 496 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Ncaph2Q8BSP2 607 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 MslnlQ8C160 685 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Plcd1Q8R3B1 756 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nop2Q922K7 793 aaKnown RBP9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 BrapQ99MP8 591 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Med4Q9CQA5 270 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Arhgap8Q9CXP4 425 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Armc9Q9D2I5 817 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Lonrf3Q9D4H7 753 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Plod3Q9R0E1 741 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Myh7bA2AQP0 1941 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Spg11Q3UHA3 2430 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 VcanQ62059 3357 aa9.77□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Ccdc173A0JLY1 547 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nlgn4lB0F2B4 945 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Kpna6O35345 536 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nmt2O70311 529 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 NapbP28663 298 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Tmprss9P69525 1065 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Pald1P70261 859 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 ZbbxQ0P5X5 716 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Mgat3Q10470 538 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 ErmnQ5EBJ4 281 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Q5XFZ0 217 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Kpna1Q60960 538 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 C2cd2lQ80X80 706 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Znf689Q8BKK5 500 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Nob1Q8BW10 403 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Gucd1Q8BZI6 239 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Wdr24Q8CFJ9 790 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Rassf8Q8CJ96 419 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Fam129bQ8R1F1 749 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Trim59Q922Y2 403 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 ZwintQ9CQU5 252 aa9.76□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Ccdc96Q9CR92 584 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms