RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 LrmpQ60664 539 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Nme8Q715T0 586 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Trim56Q80VI1 734 aaKnown RBP19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Strip2Q8C9H6 844 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Sik2Q8CFH6 931 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Atoh1P48985 351 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 N4bp3Q8C7U1 537 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Atp6v0a4Q920R6 833 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Msh6P54276 1358 aaKnown RBP19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Atp11bQ6DFW5 1175 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Clasp2Q8BRT1 1286 aaKnown RBP19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Pnma3Q8JZW8 466 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 PpanQ91YU8 470 aaKnown RBP19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 NfkbiaQ9Z1E3 314 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Trappc3O55013 180 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Mt-CybP00158 381 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 GfapP03995 430 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Chl1P70232 1209 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Atad2Q8CDM1 1040 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 Nup58Q8R332 587 aa19.86■□□□□ 0.77
Sort1-203ENSMUST00000135636 SftpbP50405 377 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ptpn14Q62130 1189 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Supt20hQ7TT00 530 aaKnown RBP19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Per2O54943 1257 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Uchl4P58321 233 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cct5P80316 541 aaKnown RBP19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Pick1Q62083 416 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Tmem39bQ810L4 492 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Micall1Q8BGT6 870 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Trex1Q91XB0 314 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 M1apQ9Z0E1 529 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Magi3Q9EQJ9 1476 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Spc25Q3UA16 226 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cog7Q3UM29 770 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Rbbp7Q60973 425 aaKnown RBP19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ppp1r37Q8BKR5 712 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Tmx3Q8BXZ1 456 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Foxp4Q9DBY0 795 aaKnown RBP19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cd2apQ9JLQ0 637 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Stat2Q9WVL2 923 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 A430078G23RikE9Q7Y4 484 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Nhej1Q3KNJ2 295 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Gba2Q69ZF3 918 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Znrd1-asQ8R0E5 213 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 TbcbQ9D1E6 244 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cyp26b1Q811W2 512 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Armc9Q9D2I5 817 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 RpgrQ9R0X5 1001 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Apol6B7ZC55 329 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Uhmk1P97343 419 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ccdc65Q8VHI7 493 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ndufs2Q91WD5 463 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Copb1Q9JIF7 953 aa19.85■□□□□ 0.77
Sort1-203ENSMUST00000135636 Zyg11aA2BFL2 627 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 SufuQ9Z0P7 484 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Mmp20P57748 482 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Afg1lQ3V384 480 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Tmem260Q8BMD6 703 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Rmdn2Q8BSE0 410 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Mylk2Q8VCR8 613 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Yipf1Q91VU1 306 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Rtl3Q6P1Y1 553 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ndufab1Q9CR21 156 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ccdc77Q9CZH8 489 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 ZwilchQ8R060 589 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Serpina3nQ91WP6 418 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Sar1bQ9CQC9 198 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 AV320801A2AWL3 467 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Gm15023L7MUB4 467 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 H2afzP0C0S6 128 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Becn2P0DM65 447 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 H2afvQ3THW5 128 aa19.84■□□□□ 0.77
Sort1-203ENSMUST00000135636 Nfkbil1O88995 381 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Pou2f3P31362 431 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cage1Q5IR70 849 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Ccdc92bQ5SUE3 299 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Znf335A2A5K6 1337 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Dennd1bQ3U1T9 766 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Rbm20Q3UQS8 1199 aaKnown RBP19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Cbwd1Q8VEH6 393 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Mfap3Q922T2 349 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Micu3Q9CTY5 523 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Gm14525B1AZA0 212 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Gm2012B1B0R1 212 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Il2P04351 169 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Akr1b1P45376 316 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 PolgP54099 1218 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Gm14819Q62478 212 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Serpinb3dQ6UKZ0 387 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Tdpoz3Q717B4 365 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 HlfQ8BW74 295 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Tmem119Q8R138 280 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Capn9Q9D805 690 aa19.83■□□□□ 0.77
Sort1-203ENSMUST00000135636 Nccrp1G3X9C2 266 aa19.83■□□□□ 0.76
Sort1-203ENSMUST00000135636 Krt10P02535 570 aa19.83■□□□□ 0.76
Sort1-203ENSMUST00000135636 Man1c1Q6NXK9 625 aa19.83■□□□□ 0.76
Sort1-203ENSMUST00000135636 Scnn1aQ61180 699 aa19.82■□□□□ 0.76
Sort1-203ENSMUST00000135636 Zfp472B0V2W5 534 aa19.82■□□□□ 0.76
Sort1-203ENSMUST00000135636 Gm6583E9Q8Z1 469 aa19.82■□□□□ 0.76
Sort1-203ENSMUST00000135636 PRAG1Q571I4 1179 aa19.82■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms