RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Prl3d3A0A0M6L0J6 224 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Arid5bQ8BM75 1188 aaKnown RBP11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 IarsQ8BU30 1262 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Camsap1A2AHC3 1581 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Serpinb9O08797 374 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cmtm5Q9D6G9 156 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Capn10Q9ESK3 666 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Clic4Q9QYB1 253 aa11.08□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cdc27A2A6Q5 825 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Casp12O08736 419 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Fam169aQ5XG69 665 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Kdm7aQ3UWM4 940 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Clic6Q8BHB9 596 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Utp6Q8VCY6 597 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Psmg1Q9JK23 289 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Urb2E9Q7L1 1524 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm10563F6WIE4 79 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Trim15G3UY57 292 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 ZfrO88532 1074 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pold1P52431 1105 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Foxp1P58462 705 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Fam8a1Q3URQ4 399 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Dhx38Q80X98 1228 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pex5lQ8C437 567 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 H6pdQ8CFX1 789 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Arl10Q9QXJ4 243 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Eif2ak4Q9QZ05 1648 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Tm6sf1P58749 370 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Arl4cP61208 192 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pcdhgc5Q91XW9 944 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Kif1cO35071 1100 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Creb3Q61817 404 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Rcor2Q8C796 523 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pglyrp2Q8VCS0 530 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3173A6NAS3 172 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3020E9Q3J7 150 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3415J3QMS8 315 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm2897K7N6T7 172 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Calb1P12658 261 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Mybl1P51960 751 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 LbrQ3U9G9 626 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3411Q8C7R2 150 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3404Q9D506 307 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Med23Q80YQ2 1367 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pole2O54956 527 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Erp29P57759 262 aaKnown RBP11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Dhx37Q6NZL1 1150 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Olfr292F8VQ84 308 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Mks1Q5SW45 561 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sptlc3Q8BG54 563 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 IkbipQ9DBZ1 373 aa11.07□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cops2P61202 443 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sycp3P70281 254 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Kcnk9Q3LS21 402 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sult1d1Q3UZZ6 295 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hspa1aQ61696 641 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Zfp113Q8C689 439 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Caap1Q8VDY9 356 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Lonrf3Q9D4H7 753 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pard6bQ9JK83 371 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Erich3F6QRE9 1637 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Stag2O35638 1231 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Vsnl1P62761 191 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 NficP70255 439 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Afap1Q80YS6 731 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Edc4Q3UJB9 1406 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 CoblQ5NBX1 1337 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sox5P35710 763 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Anks1aP59672 1150 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Polr1bP70700 1135 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Trim32Q8CH72 655 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Aipl1Q924K1 328 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Orc6Q9WUJ8 262 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 BC005561E9Q5E2 1589 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Krt24A1L317 512 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Copb2O55029 905 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 H2-EaP01904 255 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 P04224 255 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Nr2f2P43135 414 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Snrpa1P57784 255 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Spag6Q3V0U9 509 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sp4Q62445 782 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Haus4Q8BFT2 363 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 FtcdQ91XD4 541 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Mapk13Q9Z1B7 366 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Casp4P70343 373 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Trim63Q38HM4 350 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 2900092C05RikQ5I0V9 184 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Serpina3iD3Z450 408 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 R3hdm1E9Q9Q2 1135 aaKnown RBP11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Prl3d2F6R3P9 224 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Hmgxb3G3X9M3 1254 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Gm3248K7N721 186 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Klc2O88448 599 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Cdh2P15116 906 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Axdnd1Q3UZ57 424 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Sh3bp5lQ99LH9 392 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Glrx3Q9CQM9 337 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Prpsap1Q9D0M1 356 aa11.06□□□□□ -0.64
Col6a3-201ENSMUST00000056925 Pprc1Q6NZN1 1644 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms