RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YOR019WQ99248 730 aa5.73□□□□□ -1.49
VPS4YPR173C URA3P03962 267 aa5.72□□□□□ -1.49
VPS4YPR173C ATP4P05626 244 aa5.72□□□□□ -1.49
VPS4YPR173C UNG1P12887 359 aa5.72□□□□□ -1.49
VPS4YPR173C TFS1P14306 219 aa5.72□□□□□ -1.49
VPS4YPR173C SAM35P14693 329 aa5.72□□□□□ -1.49
VPS4YPR173C SIR1P21691 654 aa5.72□□□□□ -1.49
VPS4YPR173C MOT2P34909 587 aaKnown RBP5.72□□□□□ -1.49
VPS4YPR173C TAF14P35189 244 aa5.72□□□□□ -1.49
VPS4YPR173C YKL069WP36088 180 aa5.72□□□□□ -1.49
VPS4YPR173C ALG3P38179 458 aa5.72□□□□□ -1.49
VPS4YPR173C BMT2P38278 337 aa5.72□□□□□ -1.49
VPS4YPR173C YHR020WP38708 688 aaKnown RBP5.72□□□□□ -1.49
VPS4YPR173C GND1P38720 489 aaKnown RBP5.72□□□□□ -1.49
VPS4YPR173C YHL026CP38740 315 aa5.72□□□□□ -1.49
VPS4YPR173C PHM8P40025 321 aa5.72□□□□□ -1.49
VPS4YPR173C EMP65P40085 556 aa5.72□□□□□ -1.49
VPS4YPR173C PAN6P40459 309 aa5.72□□□□□ -1.49
VPS4YPR173C GTS1P40956 396 aa5.72□□□□□ -1.49
VPS4YPR173C APS3P47064 194 aa5.72□□□□□ -1.49
VPS4YPR173C TIS11P47977 285 aa5.72□□□□□ -1.49
VPS4YPR173C DBP6P53734 629 aaKnown RBP5.72□□□□□ -1.49
VPS4YPR173C MPS1P54199 764 aa5.72□□□□□ -1.49
VPS4YPR173C SDH1Q00711 640 aa5.72□□□□□ -1.49
VPS4YPR173C YDR132CQ03900 495 aa5.72□□□□□ -1.49
VPS4YPR173C SEG1Q04279 960 aa5.72□□□□□ -1.49
VPS4YPR173C SIA1Q12212 622 aa5.72□□□□□ -1.49
VPS4YPR173C LCB4Q12246 624 aa5.72□□□□□ -1.49
VPS4YPR173C RPN5Q12250 445 aaKnown RBP5.72□□□□□ -1.49
VPS4YPR173C RTN2Q12443 393 aa5.72□□□□□ -1.49
VPS4YPR173C UBR1P19812 1950 aa5.72□□□□□ -1.49
VPS4YPR173C SIR3P06701 978 aa5.71□□□□□ -1.5
VPS4YPR173C SPS1P08458 490 aa5.71□□□□□ -1.5
VPS4YPR173C DBP2P24783 546 aaKnown RBP5.71□□□□□ -1.5
VPS4YPR173C RRP7P25368 297 aaPredicted RBP5.71□□□□□ -1.5
VPS4YPR173C PEX34P25584 144 aa5.71□□□□□ -1.5
VPS4YPR173C CSE2P33308 149 aa5.71□□□□□ -1.5
VPS4YPR173C JEN1P36035 616 aa5.71□□□□□ -1.5
VPS4YPR173C MCM7P38132 845 aa5.71□□□□□ -1.5
VPS4YPR173C UBA4P38820 440 aa5.71□□□□□ -1.5
VPS4YPR173C EXO1P39875 702 aa5.71□□□□□ -1.5
VPS4YPR173C HXT9P40885 567 aa5.71□□□□□ -1.5
VPS4YPR173C YJL218WP40892 196 aaKnown RBP5.71□□□□□ -1.5
VPS4YPR173C PMT4P46971 762 aa5.71□□□□□ -1.5
VPS4YPR173C MDV1P47025 714 aa5.71□□□□□ -1.5
VPS4YPR173C YJL049WP47048 450 aa5.71□□□□□ -1.5
VPS4YPR173C MDE1P47095 244 aa5.71□□□□□ -1.5
VPS4YPR173C YAE1P47118 141 aaPredicted RBP5.71□□□□□ -1.5
VPS4YPR173C JHD2P47156 728 aaPredicted RBP5.71□□□□□ -1.5
VPS4YPR173C HMS2P47175 358 aa5.71□□□□□ -1.5
VPS4YPR173C NBP35P52920 328 aa5.71□□□□□ -1.5
VPS4YPR173C MKC7P53379 596 aa5.71□□□□□ -1.5
VPS4YPR173C GOR1P53839 350 aa5.71□□□□□ -1.5
VPS4YPR173C MRPS16Q02608 121 aa5.71□□□□□ -1.5
VPS4YPR173C NUP116Q02630 1113 aa5.71□□□□□ -1.5
VPS4YPR173C AIM36Q03798 255 aa5.71□□□□□ -1.5
VPS4YPR173C DLT1Q04216 342 aa5.71□□□□□ -1.5
VPS4YPR173C ATG38Q05789 226 aaKnown RBP5.71□□□□□ -1.5
VPS4YPR173C YLR225CQ05948 407 aaKnown RBP5.71□□□□□ -1.5
VPS4YPR173C ECM22Q05958 814 aaPredicted RBP5.71□□□□□ -1.5
VPS4YPR173C YLR446WQ06204 433 aa5.71□□□□□ -1.5
VPS4YPR173C PHO92Q06390 306 aa5.71□□□□□ -1.5
VPS4YPR173C RRP9Q06506 573 aaKnown RBP5.71□□□□□ -1.5
VPS4YPR173C GIC2Q06648 383 aa5.71□□□□□ -1.5
VPS4YPR173C RAD34Q06665 692 aa5.71□□□□□ -1.5
VPS4YPR173C MDM32Q12171 622 aa5.71□□□□□ -1.5
VPS4YPR173C SUS1Q6WNK7 96 aa5.71□□□□□ -1.5
VPS4YPR173C YCL012CQ8J0M4 134 aa5.71□□□□□ -1.5
VPS4YPR173C HAP2P06774 265 aa5.7□□□□□ -1.5
VPS4YPR173C RED1P14291 827 aa5.7□□□□□ -1.5
VPS4YPR173C PPH22P23595 377 aa5.7□□□□□ -1.5
VPS4YPR173C RER1P25560 188 aa5.7□□□□□ -1.5
VPS4YPR173C RMA1P36001 430 aaKnown RBP5.7□□□□□ -1.5
VPS4YPR173C DHR2P36009 735 aaPredicted RBP5.7□□□□□ -1.5
VPS4YPR173C RSM22P36056 628 aa5.7□□□□□ -1.5
VPS4YPR173C DRE2P36152 348 aa5.7□□□□□ -1.5
VPS4YPR173C YBR056WP38081 501 aa5.7□□□□□ -1.5
VPS4YPR173C COS111P38308 924 aa5.7□□□□□ -1.5
VPS4YPR173C LEU5P38702 357 aa5.7□□□□□ -1.5
VPS4YPR173C SBE22P38814 852 aa5.7□□□□□ -1.5
VPS4YPR173C MDM31P38880 579 aa5.7□□□□□ -1.5
VPS4YPR173C PLB1P39105 664 aa5.7□□□□□ -1.5
VPS4YPR173C RRG9P40156 214 aa5.7□□□□□ -1.5
VPS4YPR173C TES1P41903 349 aaKnown RBP5.7□□□□□ -1.5
VPS4YPR173C AIM22P47051 409 aa5.7□□□□□ -1.5
VPS4YPR173C STE24P47154 453 aa5.7□□□□□ -1.5
VPS4YPR173C MPC1P53157 130 aaKnown RBP5.7□□□□□ -1.5
VPS4YPR173C ZRG17P53735 605 aa5.7□□□□□ -1.5
VPS4YPR173C MET31Q03081 177 aa5.7□□□□□ -1.5
VPS4YPR173C NGL2Q03264 515 aaKnown RBP5.7□□□□□ -1.5
VPS4YPR173C HER2Q03557 464 aa5.7□□□□□ -1.5
VPS4YPR173C SSL1Q04673 461 aaPredicted RBP5.7□□□□□ -1.5
VPS4YPR173C COX20Q04935 205 aa5.7□□□□□ -1.5
VPS4YPR173C YMR034CQ05131 434 aaPredicted RBP5.7□□□□□ -1.5
VPS4YPR173C YLR283WQ05867 314 aa5.7□□□□□ -1.5
VPS4YPR173C YLR257WQ06146 321 aaKnown RBP5.7□□□□□ -1.5
VPS4YPR173C ASR1Q06834 288 aa5.7□□□□□ -1.5
VPS4YPR173C YLR012CQ07927 99 aa5.7□□□□□ -1.5
VPS4YPR173C ESC8Q08119 714 aa5.7□□□□□ -1.5
VPS4YPR173C FEX1Q08913 375 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms