RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C SEM1O94742 89 aa1.91□□□□□ -2.1
ATG11YPR049C RPS8AP0CX39 200 aaKnown RBP1.91□□□□□ -2.1
ATG11YPR049C RPS8BP0CX40 200 aaKnown RBP1.91□□□□□ -2.1
ATG11YPR049C AAD3P25612 363 aa1.91□□□□□ -2.1
ATG11YPR049C APD1P38281 316 aa1.91□□□□□ -2.1
ATG11YPR049C PRM2P40534 656 aa1.91□□□□□ -2.1
ATG11YPR049C YFL051CP43552 160 aa1.91□□□□□ -2.1
ATG11YPR049C RPL22BP56628 122 aaKnown RBP1.91□□□□□ -2.1
ATG11YPR049C RLI1Q03195 608 aaKnown RBP1.91□□□□□ -2.1
ATG11YPR049C YMR310CQ04867 317 aaPredicted RBP1.91□□□□□ -2.1
ATG11YPR049C PSR2Q07949 397 aa1.91□□□□□ -2.1
ATG11YPR049C YOR365CQ08844 703 aa1.91□□□□□ -2.1
ATG11YPR049C DAP2P18962 818 aa1.9□□□□□ -2.1
ATG11YPR049C CHA1P25379 360 aaKnown RBP1.9□□□□□ -2.1
ATG11YPR049C OAF3P36023 863 aa1.9□□□□□ -2.1
ATG11YPR049C OTU2P38747 307 aaKnown RBP1.9□□□□□ -2.1
ATG11YPR049C HIS6P40545 261 aa1.9□□□□□ -2.1
ATG11YPR049C PEF1P53238 335 aa1.9□□□□□ -2.1
ATG11YPR049C PRP38Q00723 242 aaPredicted RBP1.9□□□□□ -2.1
ATG11YPR049C MRPL1Q04599 285 aa1.9□□□□□ -2.1
ATG11YPR049C SMA2Q04658 369 aa1.9□□□□□ -2.1
ATG11YPR049C YPR174CQ06616 221 aaPredicted RBP1.9□□□□□ -2.1
ATG11YPR049C SPS22P25380 463 aa1.9□□□□□ -2.11
ATG11YPR049C SPC110P32380 944 aa1.9□□□□□ -2.11
ATG11YPR049C HXT3P32466 567 aaKnown RBP1.9□□□□□ -2.11
ATG11YPR049C GET2P40056 285 aa1.9□□□□□ -2.11
ATG11YPR049C SNO3P43544 222 aa1.9□□□□□ -2.11
ATG11YPR049C YGR021WP53212 290 aa1.9□□□□□ -2.11
ATG11YPR049C IMO32P53219 342 aa1.9□□□□□ -2.11
ATG11YPR049C PCP1P53259 346 aa1.9□□□□□ -2.11
ATG11YPR049C MSA1Q08471 629 aa1.9□□□□□ -2.11
ATG11YPR049C FMP40Q08968 688 aaPredicted RBP1.9□□□□□ -2.11
ATG11YPR049C ATG29Q12092 213 aa1.9□□□□□ -2.11
ATG11YPR049C ICT1Q12385 394 aa1.9□□□□□ -2.11
ATG11YPR049C SPO24Q3E752 67 aa1.9□□□□□ -2.11
ATG11YPR049C TAD3Q9URQ3 322 aa1.9□□□□□ -2.11
ATG11YPR049C SPS100P13130 326 aa1.9□□□□□ -2.11
ATG11YPR049C GFD2P25370 566 aaKnown RBP1.9□□□□□ -2.11
ATG11YPR049C MRC1P25588 1096 aa1.9□□□□□ -2.11
ATG11YPR049C EMP70P32802 667 aa1.9□□□□□ -2.11
ATG11YPR049C UBC6P33296 250 aaPredicted RBP1.9□□□□□ -2.11
ATG11YPR049C YNK1P36010 153 aaKnown RBP1.9□□□□□ -2.11
ATG11YPR049C ASC1P38011 319 aaKnown RBP1.9□□□□□ -2.11
ATG11YPR049C CUE1P38428 203 aa1.9□□□□□ -2.11
ATG11YPR049C ALB1P47019 175 aaPredicted RBP1.9□□□□□ -2.11
ATG11YPR049C BIO3P50277 480 aa1.9□□□□□ -2.11
ATG11YPR049C YGR054WP53235 642 aaKnown RBP1.9□□□□□ -2.11
ATG11YPR049C PRM15Q03262 622 aa1.9□□□□□ -2.11
ATG11YPR049C PFK27Q12471 397 aaPredicted RBP1.9□□□□□ -2.11
ATG11YPR049C MTR10Q99189 972 aa1.9□□□□□ -2.11
ATG11YPR049C TY2A-LR1P0C2J4 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-FP0CX61 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-GR2P0CX62 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-CP25383 438 aa1.89□□□□□ -2.11
ATG11YPR049C RPT5P33297 434 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C NAB3P38996 802 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
ATG11YPR049C ERR3P42222 437 aa1.89□□□□□ -2.11
ATG11YPR049C PRM10P42946 383 aa1.89□□□□□ -2.11
ATG11YPR049C MDM34P53083 459 aa1.89□□□□□ -2.11
ATG11YPR049C YGR067CP53243 804 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-DR2Q03483 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-BQ12260 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-OR2Q12293 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-DR1Q12392 438 aa1.89□□□□□ -2.11
ATG11YPR049C TY2A-OR1Q12439 438 aa1.89□□□□□ -2.11
ATG11YPR049C DET1Q99288 334 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C TY2A-DR3Q99303 438 aa1.89□□□□□ -2.11
ATG11YPR049C SPT3P06844 337 aa1.89□□□□□ -2.11
ATG11YPR049C CBP6P07253 162 aaPredicted RBP1.89□□□□□ -2.11
ATG11YPR049C PRB1P09232 635 aa1.89□□□□□ -2.11
ATG11YPR049C RPS21AP0C0V8 87 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C MF(ALPHA)2P32435 120 aa1.89□□□□□ -2.11
ATG11YPR049C SSZ1P38788 538 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C PTR3P43606 678 aa1.89□□□□□ -2.11
ATG11YPR049C BIT61P47041 543 aa1.89□□□□□ -2.11
ATG11YPR049C IBA57P47158 497 aa1.89□□□□□ -2.11
ATG11YPR049C KEL2P50090 882 aa1.89□□□□□ -2.11
ATG11YPR049C MRPL19P53875 158 aa1.89□□□□□ -2.11
ATG11YPR049C RHO5P53879 331 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C PET117Q02771 107 aa1.89□□□□□ -2.11
ATG11YPR049C ARX1Q03862 593 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C NOP6Q07623 225 aaKnown RBP1.89□□□□□ -2.11
ATG11YPR049C SIA1Q12212 622 aa1.89□□□□□ -2.11
ATG11YPR049C YOR114WQ12219 294 aa1.89□□□□□ -2.11
ATG11YPR049C REP1P03871 373 aa1.88□□□□□ -2.11
ATG11YPR049C ERD1P16151 362 aa1.88□□□□□ -2.11
ATG11YPR049C PHO13P19881 312 aa1.88□□□□□ -2.11
ATG11YPR049C SGV1P23293 657 aaKnown RBP1.88□□□□□ -2.11
ATG11YPR049C MEI5P32489 222 aa1.88□□□□□ -2.11
ATG11YPR049C SUI1P32911 108 aaKnown RBP1.88□□□□□ -2.11
ATG11YPR049C BYE1P36106 594 aa1.88□□□□□ -2.11
ATG11YPR049C RGI2P40188 164 aa1.88□□□□□ -2.11
ATG11YPR049C SKI8Q02793 397 aaPredicted RBP1.88□□□□□ -2.11
ATG11YPR049C NUP53Q03790 475 aa1.88□□□□□ -2.11
ATG11YPR049C VPS20Q04272 221 aa1.88□□□□□ -2.11
ATG11YPR049C BCH1Q05029 724 aa1.88□□□□□ -2.11
ATG11YPR049C IPK1Q06667 281 aa1.88□□□□□ -2.11
ATG11YPR049C ATG23Q06671 453 aa1.88□□□□□ -2.11
ATG11YPR049C COS7Q07788 383 aa1.88□□□□□ -2.11
ATG11YPR049C LSP1Q12230 341 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms