RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C EXG1P23776 448 aaKnown RBP3.33□□□□□ -1.88
CCL1YPR025C POP5P28005 173 aa3.33□□□□□ -1.88
CCL1YPR025C KAR9P32526 644 aa3.33□□□□□ -1.88
CCL1YPR025C MDL1P33310 695 aa3.33□□□□□ -1.88
CCL1YPR025C SKN1P33336 771 aa3.33□□□□□ -1.88
CCL1YPR025C RRP1P35178 278 aaPredicted RBP3.33□□□□□ -1.88
CCL1YPR025C SDS24P38314 527 aa3.33□□□□□ -1.88
CCL1YPR025C INM1P38710 295 aa3.33□□□□□ -1.88
CCL1YPR025C YIL029CP40538 142 aa3.33□□□□□ -1.88
CCL1YPR025C TOS3P43637 560 aa3.33□□□□□ -1.88
CCL1YPR025C NDE2Q07500 545 aa3.33□□□□□ -1.88
CCL1YPR025C RAX1Q08760 435 aa3.33□□□□□ -1.88
CCL1YPR025C PHO91P27514 894 aa3.32□□□□□ -1.88
CCL1YPR025C MRPL10P36520 322 aa3.32□□□□□ -1.88
CCL1YPR025C DED81P38707 554 aaKnown RBP3.32□□□□□ -1.88
CCL1YPR025C SBE22P38814 852 aa3.32□□□□□ -1.88
CCL1YPR025C MMF1P40185 145 aaKnown RBP3.32□□□□□ -1.88
CCL1YPR025C SIM1P40472 476 aa3.32□□□□□ -1.88
CCL1YPR025C MDE1P47095 244 aa3.32□□□□□ -1.88
CCL1YPR025C ATP1P07251 545 aaKnown RBP3.31□□□□□ -1.88
CCL1YPR025C NAM2P11325 894 aa3.31□□□□□ -1.88
CCL1YPR025C CAP2P13517 287 aa3.31□□□□□ -1.88
CCL1YPR025C RVS161P25343 265 aaKnown RBP3.31□□□□□ -1.88
CCL1YPR025C LDB16P25587 256 aa3.31□□□□□ -1.88
CCL1YPR025C PHA2P32452 334 aa3.31□□□□□ -1.88
CCL1YPR025C CSE2P33308 149 aa3.31□□□□□ -1.88
CCL1YPR025C QDR3P38227 689 aa3.31□□□□□ -1.88
CCL1YPR025C PFF1P38244 976 aa3.31□□□□□ -1.88
CCL1YPR025C COX14P39103 70 aa3.31□□□□□ -1.88
CCL1YPR025C MTQ1P53944 314 aa3.31□□□□□ -1.88
CCL1YPR025C ECM7Q06200 448 aa3.31□□□□□ -1.88
CCL1YPR025C NSE1Q07913 336 aa3.31□□□□□ -1.88
CCL1YPR025C ISY1P21374 235 aaPredicted RBP3.3□□□□□ -1.88
CCL1YPR025C RRP7P25368 297 aaPredicted RBP3.3□□□□□ -1.88
CCL1YPR025C NRP1P32770 719 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
CCL1YPR025C YSC83P32792 385 aa3.3□□□□□ -1.88
CCL1YPR025C COX13P32799 129 aa3.3□□□□□ -1.88
CCL1YPR025C YHR131CP38835 850 aa3.3□□□□□ -1.88
CCL1YPR025C PRE5P40302 234 aaKnown RBP3.3□□□□□ -1.88
CCL1YPR025C SDT1P53078 280 aa3.3□□□□□ -1.88
CCL1YPR025C MRM2P53123 320 aa3.3□□□□□ -1.88
CCL1YPR025C SPR6Q01684 191 aa3.3□□□□□ -1.88
CCL1YPR025C ADA2Q02336 434 aa3.3□□□□□ -1.88
CCL1YPR025C TMC1Q08422 150 aaPredicted RBP3.3□□□□□ -1.88
CCL1YPR025C SNU66Q12420 587 aaPredicted RBP3.3□□□□□ -1.88
CCL1YPR025C OPI3P05375 206 aa3.29□□□□□ -1.88
CCL1YPR025C SLM5P25345 492 aaKnown RBP3.29□□□□□ -1.88
CCL1YPR025C JEM1P40358 645 aa3.29□□□□□ -1.88
CCL1YPR025C YJR085CP47131 105 aaKnown RBP3.29□□□□□ -1.88
CCL1YPR025C MEH1Q02205 184 aa3.29□□□□□ -1.88
CCL1YPR025C IRC25Q07951 179 aa3.29□□□□□ -1.88
CCL1YPR025C FDH1Q08911 376 aa3.29□□□□□ -1.88
CCL1YPR025C RNH203Q12338 110 aa3.29□□□□□ -1.88
CCL1YPR025C WTM1Q12363 437 aaKnown RBP3.29□□□□□ -1.88
CCL1YPR025C AHC1Q12433 566 aa3.29□□□□□ -1.88
CCL1YPR025C POM152P39685 1337 aa3.28□□□□□ -1.88
CCL1YPR025C MNL1P38888 796 aa3.28□□□□□ -1.88
CCL1YPR025C ATM1P40416 690 aa3.28□□□□□ -1.88
CCL1YPR025C STE24P47154 453 aa3.28□□□□□ -1.88
CCL1YPR025C SHE10P53075 577 aa3.28□□□□□ -1.88
CCL1YPR025C ERO1Q03103 563 aa3.28□□□□□ -1.88
CCL1YPR025C NDL1Q06568 189 aa3.28□□□□□ -1.88
CCL1YPR025C MDM36Q06820 579 aa3.28□□□□□ -1.88
CCL1YPR025C RBD2Q12270 262 aa3.28□□□□□ -1.88
CCL1YPR025C CEX1Q12453 761 aa3.28□□□□□ -1.88
CCL1YPR025C MRPL4P36517 319 aa3.27□□□□□ -1.89
CCL1YPR025C SEC28P40509 296 aaKnown RBP3.27□□□□□ -1.89
CCL1YPR025C AIM24P47127 394 aa3.27□□□□□ -1.89
CCL1YPR025C YIP5P53108 310 aa3.27□□□□□ -1.89
CCL1YPR025C YDR541CQ03049 344 aa3.27□□□□□ -1.89
CCL1YPR025C YMR102CQ03177 834 aa3.27□□□□□ -1.89
CCL1YPR025C ADD37Q03233 198 aa3.27□□□□□ -1.89
CCL1YPR025C SMC5Q08204 1093 aa3.27□□□□□ -1.89
CCL1YPR025C CUE5Q08412 411 aaKnown RBP3.27□□□□□ -1.89
CCL1YPR025C YGK3Q12222 375 aaPredicted RBP3.27□□□□□ -1.89
CCL1YPR025C IZH2Q12442 317 aa3.27□□□□□ -1.89
CCL1YPR025C SSC1P0CS90 654 aaKnown RBP3.26□□□□□ -1.89
CCL1YPR025C MSI1P13712 422 aa3.26□□□□□ -1.89
CCL1YPR025C DPH5P32469 300 aaPredicted RBP3.26□□□□□ -1.89
CCL1YPR025C YEF1P32622 495 aa3.26□□□□□ -1.89
CCL1YPR025C SKT5P34226 696 aa3.26□□□□□ -1.89
CCL1YPR025C DOA1P36037 715 aa3.26□□□□□ -1.89
CCL1YPR025C PAC11P40960 533 aa3.26□□□□□ -1.89
CCL1YPR025C HAC1P41546 238 aa3.26□□□□□ -1.89
CCL1YPR025C LCB3P47013 409 aa3.26□□□□□ -1.89
CCL1YPR025C RRP46P53256 223 aaPredicted RBP3.26□□□□□ -1.89
CCL1YPR025C YGR117CP53270 476 aa3.26□□□□□ -1.89
CCL1YPR025C COS1P53822 381 aa3.26□□□□□ -1.89
CCL1YPR025C URC2Q04411 772 aa3.26□□□□□ -1.89
CCL1YPR025C MHR1Q06630 226 aa3.26□□□□□ -1.89
CCL1YPR025C EAF3Q12432 401 aa3.26□□□□□ -1.89
CCL1YPR025C TPK3P05986 398 aa3.25□□□□□ -1.89
CCL1YPR025C PIS1P06197 220 aaKnown RBP3.25□□□□□ -1.89
CCL1YPR025C RPL12AP0CX53 165 aaKnown RBP3.25□□□□□ -1.89
CCL1YPR025C RPL12BP0CX54 165 aa3.25□□□□□ -1.89
CCL1YPR025C ARF1P11076 181 aaKnown RBP3.25□□□□□ -1.89
CCL1YPR025C KAP104P38217 918 aaKnown RBP3.25□□□□□ -1.89
CCL1YPR025C MLH1P38920 769 aa3.25□□□□□ -1.89
CCL1YPR025C MAM33P40513 266 aa3.25□□□□□ -1.89
CCL1YPR025C YFR057WP43625 151 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms