RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	YPL199C	Q08954	240 aa		3.44	□□□□□ -1.86
CAF20	YOR276W	MRS3	P10566	314 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	MTF1	P14908	341 aa	Known RBP	3.43	□□□□□ -1.86
CAF20	YOR276W	SLY1	P22213	666 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	HXT2	P23585	541 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	DBR1	P24309	405 aa	Known RBP	3.43	□□□□□ -1.86
CAF20	YOR276W	DAL80	P26343	269 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	COX13	P32799	129 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	PPQ1	P32945	549 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	DOA1	P36037	715 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	YBR139W	P38109	508 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	MST28	P39552	234 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	YND1	P40009	630 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	ATM1	P40416	690 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	TES1	P41903	349 aa	Known RBP	3.43	□□□□□ -1.86
CAF20	YOR276W	YFR018C	P43599	363 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	STE24	P47154	453 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	RPM2	Q02773	1202 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	ARR1	Q06596	294 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	YPR078C	Q06813	372 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	LDS2	Q08218	356 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	GLE1	Q12315	538 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	NCA2	Q12374	616 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	PFK27	Q12471	397 aa	Predicted RBP	3.43	□□□□□ -1.86
CAF20	YOR276W	RAD61	Q99359	647 aa		3.43	□□□□□ -1.86
CAF20	YOR276W	CBP2	P03874	630 aa	Predicted RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	TPK3	P05986	398 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	ATP1	P07251	545 aa	Known RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	ARF1	P11076	181 aa	Known RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	GAL3	P13045	520 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	DBP3	P20447	523 aa	Known RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	MSK1	P32048	576 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	SSE1	P32589	693 aa	Known RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	RIB7	P33312	244 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	SPT10	P35208	640 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	KKQ8	P36004	724 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	MRPL40	P36534	297 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	ATP3	P38077	311 aa	Known RBP	3.42	□□□□□ -1.86
CAF20	YOR276W	BZZ1	P38822	633 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	ALP1	P38971	573 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	SSO2	P39926	295 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	SIM1	P40472	476 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	RTT101	P47050	842 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	SSN8	P47821	323 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	AZR1	P50080	613 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	ARP5	P53946	755 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	AIM33	Q04516	312 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	YLR281C	Q05863	155 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	AYT1	Q12226	474 aa		3.42	□□□□□ -1.86
CAF20	YOR276W	HEM2	P05373	342 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	CDC37	P06101	506 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	RPL20A	P0CX23	172 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	RPL20B	P0CX24	172 aa	Predicted RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	RNA1	P11745	407 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	HMX1	P32339	317 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	PMU1	P36069	295 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	TIF5	P38431	405 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	AIM20	P40451	204 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	RPR2	P40571	144 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	TOS3	P43637	560 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	YGL114W	P53134	725 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	LSC1	P53598	329 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	YNL146W	P53906	100 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	STE23	Q06010	1027 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	AIM45	Q12480	344 aa	Known RBP	3.41	□□□□□ -1.86
CAF20	YOR276W	SPO24	Q3E752	67 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	FSH3	Q99369	266 aa		3.41	□□□□□ -1.86
CAF20	YOR276W	RPL15A	P05748	204 aa	Known RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	GAL7	P08431	366 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	RNR2	P09938	399 aa	Known RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	GCD2	P12754	651 aa	Predicted RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	SEC1	P30619	724 aa	Known RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	LOS1	P33418	1100 aa	Predicted RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	RIB5	P38145	238 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	OST1	P41543	476 aa	Known RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	SPG5	P42933	373 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	SAD1	P43589	448 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	YHC3	P47040	408 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	RET3	P53600	189 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	CAF40	P53829	373 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	GOR1	P53839	350 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	SPR6	Q01684	191 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	CCE1	Q03702	353 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	SMP3	Q04174	516 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	MSC3	Q05812	728 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	YLR297W	Q05899	129 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	SNX3	Q08826	162 aa	Known RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	RRP36	Q12481	300 aa	Predicted RBP	3.4	□□□□□ -1.87
CAF20	YOR276W	SET6	Q12529	373 aa		3.4	□□□□□ -1.87
CAF20	YOR276W	CLN3	P13365	580 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	PUT4	P15380	627 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	PUT3	P25502	979 aa	Predicted RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	YCL068C	P25593	260 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	SKT5	P34226	696 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	END3	P39013	349 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	MNN9	P39107	395 aa	Known RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	FAA2	P39518	744 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	PRP39	P39682	629 aa	Known RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	YJL070C	P40361	888 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	LYS12	P40495	371 aa	Known RBP	3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms