RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W RBD2Q12270 262 aa3.62□□□□□ -1.83
ABP140YOR239W SFM1Q12314 213 aa3.62□□□□□ -1.83
ABP140YOR239W PNS1Q12412 539 aa3.62□□□□□ -1.83
ABP140YOR239W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W TY1A-OLQ92392 440 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W CYT1P07143 309 aa3.62□□□□□ -1.83
ABP140YOR239W SPE1P08432 466 aa3.62□□□□□ -1.83
ABP140YOR239W RPL4AP10664 362 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W TCP1P12612 559 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W URA6P15700 204 aa3.62□□□□□ -1.83
ABP140YOR239W DBR1P24309 405 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W PPZ1P26570 692 aa3.62□□□□□ -1.83
ABP140YOR239W URA7P28274 579 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W DEG1P31115 442 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W MRPL9P31334 269 aa3.62□□□□□ -1.83
ABP140YOR239W ARO7P32178 256 aa3.62□□□□□ -1.83
ABP140YOR239W PRO3P32263 286 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W AEP1P32493 518 aa3.62□□□□□ -1.83
ABP140YOR239W YNK1P36010 153 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W YKL069WP36088 180 aa3.62□□□□□ -1.83
ABP140YOR239W MBA1P38300 278 aa3.62□□□□□ -1.83
ABP140YOR239W UBA4P38820 440 aa3.62□□□□□ -1.83
ABP140YOR239W SPL2P38839 148 aa3.62□□□□□ -1.83
ABP140YOR239W ACO2P39533 789 aa3.62□□□□□ -1.83
ABP140YOR239W YEL025CP39991 1188 aa3.62□□□□□ -1.83
ABP140YOR239W YMR144WP40214 342 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W PFA3P42836 336 aa3.62□□□□□ -1.83
ABP140YOR239W NSE4P43124 402 aa3.62□□□□□ -1.83
ABP140YOR239W RGD2P43556 714 aa3.62□□□□□ -1.83
ABP140YOR239W SNG1P46950 547 aa3.62□□□□□ -1.83
ABP140YOR239W MPS3P47069 682 aa3.62□□□□□ -1.83
ABP140YOR239W YJR056CP47115 236 aa3.62□□□□□ -1.83
ABP140YOR239W RPL4BP49626 362 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W YGL039WP53183 348 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W CUS2P53830 285 aaPredicted RBP3.62□□□□□ -1.83
ABP140YOR239W GPD1Q00055 391 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W RNY1Q02933 434 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W OYE2Q03558 400 aaKnown RBP3.62□□□□□ -1.83
ABP140YOR239W SYT1Q06836 1226 aa3.62□□□□□ -1.83
ABP140YOR239W ESC8Q08119 714 aa3.62□□□□□ -1.83
ABP140YOR239W YPL272CQ08984 517 aa3.62□□□□□ -1.83
ABP140YOR239W RTK1Q12100 620 aaPredicted RBP3.62□□□□□ -1.83
ABP140YOR239W APC9Q12107 265 aa3.62□□□□□ -1.83
ABP140YOR239W NSL1Q12143 216 aa3.62□□□□□ -1.83
ABP140YOR239W YLL058WQ12198 575 aa3.62□□□□□ -1.83
ABP140YOR239W YPL119C-AQ3E751 87 aa3.62□□□□□ -1.83
ABP140YOR239W MOT1P32333 1867 aa3.62□□□□□ -1.83
ABP140YOR239W RIF1P29539 1916 aa3.61□□□□□ -1.83
ABP140YOR239W YLR422WQ06409 1932 aa3.61□□□□□ -1.83
ABP140YOR239W INH1P01097 85 aa3.61□□□□□ -1.83
ABP140YOR239W GAL80P04387 435 aa3.61□□□□□ -1.83
ABP140YOR239W AAC1P04710 309 aa3.61□□□□□ -1.83
ABP140YOR239W RPS31P05759 152 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W CTT1P06115 562 aa3.61□□□□□ -1.83
ABP140YOR239W RAD52P06778 471 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W TRP4P07285 380 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W CDC4P07834 779 aa3.61□□□□□ -1.83
ABP140YOR239W YPK1P12688 680 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W CAF20P12962 161 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W AFT1P22149 690 aa3.61□□□□□ -1.83
ABP140YOR239W DAL2P25335 343 aa3.61□□□□□ -1.83
ABP140YOR239W YUR1P26725 428 aa3.61□□□□□ -1.83
ABP140YOR239W SSS1P35179 80 aa3.61□□□□□ -1.83
ABP140YOR239W BET3P36149 193 aa3.61□□□□□ -1.83
ABP140YOR239W FUI1P38196 639 aa3.61□□□□□ -1.83
ABP140YOR239W EXO5P38289 585 aa3.61□□□□□ -1.83
ABP140YOR239W ARN1P38731 627 aa3.61□□□□□ -1.83
ABP140YOR239W SSN3P39073 555 aa3.61□□□□□ -1.83
ABP140YOR239W FLC2P39719 783 aa3.61□□□□□ -1.83
ABP140YOR239W NPR2P39923 615 aa3.61□□□□□ -1.83
ABP140YOR239W VRG4P40107 337 aa3.61□□□□□ -1.83
ABP140YOR239W ICE2P40499 491 aa3.61□□□□□ -1.83
ABP140YOR239W LOC1P43586 204 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W MSB3P48566 633 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W YBP2P53169 641 aa3.61□□□□□ -1.83
ABP140YOR239W RRN9P53437 365 aa3.61□□□□□ -1.83
ABP140YOR239W CBK1P53894 756 aa3.61□□□□□ -1.83
ABP140YOR239W MRPS17Q03246 237 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W MAK3Q03503 176 aa3.61□□□□□ -1.83
ABP140YOR239W YMR265CQ03508 461 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W TRS130Q03660 1102 aa3.61□□□□□ -1.83
ABP140YOR239W PUN1Q06991 263 aa3.61□□□□□ -1.83
ABP140YOR239W TPO1Q07824 586 aa3.61□□□□□ -1.83
ABP140YOR239W PML1Q07930 204 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W FMP25Q08023 583 aa3.61□□□□□ -1.83
ABP140YOR239W RRP40Q08285 240 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W LAP2Q10740 671 aa3.61□□□□□ -1.83
ABP140YOR239W YGK3Q12222 375 aaPredicted RBP3.61□□□□□ -1.83
ABP140YOR239W LPX1Q12405 387 aaKnown RBP3.61□□□□□ -1.83
ABP140YOR239W YOL159C-AQ3E769 90 aa3.61□□□□□ -1.83
ABP140YOR239W MHF1Q3E835 90 aa3.61□□□□□ -1.83
ABP140YOR239W FRT1Q99332 602 aa3.61□□□□□ -1.83
ABP140YOR239W RPP2AP05319 106 aaKnown RBP3.6□□□□□ -1.83
ABP140YOR239W UTR1P21373 530 aa3.6□□□□□ -1.83
ABP140YOR239W CDC20P26309 610 aa3.6□□□□□ -1.83
ABP140YOR239W IDH1P28834 360 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
ABP140YOR239W ERG9P29704 444 aa3.6□□□□□ -1.83
ABP140YOR239W SOL2P37262 315 aa3.6□□□□□ -1.83
ABP140YOR239W HMT1P38074 348 aa3.6□□□□□ -1.83
ABP140YOR239W YBR013CP38215 129 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms