RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C MKK1P32490 508 aa5.05□□□□□ -1.6
RAT1YOR048C TIP20P33891 701 aa5.05□□□□□ -1.6
RAT1YOR048C MRPL40P36534 297 aa5.05□□□□□ -1.6
RAT1YOR048C MNN9P39107 395 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C VAC8P39968 578 aa5.05□□□□□ -1.6
RAT1YOR048C FAU1P40099 211 aa5.05□□□□□ -1.6
RAT1YOR048C IME4P41833 600 aa5.05□□□□□ -1.6
RAT1YOR048C NAS6P50086 228 aa5.05□□□□□ -1.6
RAT1YOR048C CDH1P53197 566 aa5.05□□□□□ -1.6
RAT1YOR048C SLI1P53304 468 aa5.05□□□□□ -1.6
RAT1YOR048C VPS74Q06385 345 aa5.05□□□□□ -1.6
RAT1YOR048C VPS36Q06696 566 aa5.05□□□□□ -1.6
RAT1YOR048C PUN1Q06991 263 aa5.05□□□□□ -1.6
RAT1YOR048C LDB19Q12502 818 aa5.05□□□□□ -1.6
RAT1YOR048C HRP1Q99383 534 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C HTS1P07263 546 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C IDP1P21954 428 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C PBN1P25580 416 aa5.05□□□□□ -1.6
RAT1YOR048C YCR102CP25608 368 aa5.05□□□□□ -1.6
RAT1YOR048C ASC1P38011 319 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C CHS7P38843 316 aa5.05□□□□□ -1.6
RAT1YOR048C SER33P40510 469 aa5.05□□□□□ -1.6
RAT1YOR048C ATG18P43601 500 aa5.05□□□□□ -1.6
RAT1YOR048C SIP4P46954 829 aa5.05□□□□□ -1.6
RAT1YOR048C APS3P47064 194 aa5.05□□□□□ -1.6
RAT1YOR048C GCV1P48015 400 aa5.05□□□□□ -1.6
RAT1YOR048C ERG26P53199 349 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C MTQ1P53944 314 aa5.05□□□□□ -1.6
RAT1YOR048C MSS11Q03825 758 aa5.05□□□□□ -1.6
RAT1YOR048C YML083CQ04526 418 aa5.05□□□□□ -1.6
RAT1YOR048C GAD1Q04792 585 aa5.05□□□□□ -1.6
RAT1YOR048C YMR252CQ04814 134 aa5.05□□□□□ -1.6
RAT1YOR048C VID22Q05934 901 aa5.05□□□□□ -1.6
RAT1YOR048C YPR114WQ06107 315 aa5.05□□□□□ -1.6
RAT1YOR048C TY1A-DR3Q12441 440 aa5.05□□□□□ -1.6
RAT1YOR048C YCL012CQ8J0M4 134 aa5.05□□□□□ -1.6
RAT1YOR048C YCP4P25349 247 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C YCR100CP25606 316 aa5.05□□□□□ -1.6
RAT1YOR048C TAH1P25638 111 aaPredicted RBP5.05□□□□□ -1.6
RAT1YOR048C CDC12P32468 407 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C MOT2P34909 587 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C UIP5P36137 443 aa5.05□□□□□ -1.6
RAT1YOR048C YCR087C-AP37263 153 aa5.05□□□□□ -1.6
RAT1YOR048C MRPL16P38064 232 aa5.05□□□□□ -1.6
RAT1YOR048C RRP4P38792 359 aaKnown RBP5.05□□□□□ -1.6
RAT1YOR048C SSN3P39073 555 aa5.05□□□□□ -1.6
RAT1YOR048C YJL043WP47053 257 aa5.05□□□□□ -1.6
RAT1YOR048C COS1P53822 381 aa5.05□□□□□ -1.6
RAT1YOR048C YML020WQ03722 664 aa5.05□□□□□ -1.6
RAT1YOR048C YPR109WQ06104 294 aa5.05□□□□□ -1.6
RAT1YOR048C ATG31Q12421 196 aa5.05□□□□□ -1.6
RAT1YOR048C YOR019WQ99248 730 aa5.05□□□□□ -1.6
RAT1YOR048C BUD5P25300 642 aaPredicted RBP5.04□□□□□ -1.6
RAT1YOR048C RSM22P36056 628 aa5.04□□□□□ -1.6
RAT1YOR048C LRP1P38801 184 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C YHR177WP38867 453 aa5.04□□□□□ -1.6
RAT1YOR048C PHM8P40025 321 aa5.04□□□□□ -1.6
RAT1YOR048C TOS2P50078 622 aa5.04□□□□□ -1.6
RAT1YOR048C BSP1Q06604 576 aa5.04□□□□□ -1.6
RAT1YOR048C APC5Q08683 685 aa5.04□□□□□ -1.6
RAT1YOR048C YDL109CQ12103 647 aa5.04□□□□□ -1.6
RAT1YOR048C PER33Q12144 273 aa5.04□□□□□ -1.6
RAT1YOR048C YPR1Q12458 312 aa5.04□□□□□ -1.6
RAT1YOR048C IRA2P19158 3079 aa5.04□□□□□ -1.6
RAT1YOR048C SIR1P21691 654 aa5.04□□□□□ -1.6
RAT1YOR048C AGP1P25376 633 aa5.04□□□□□ -1.6
RAT1YOR048C OAC1P32332 324 aa5.04□□□□□ -1.6
RAT1YOR048C NRP1P32770 719 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
RAT1YOR048C SSO1P32867 290 aa5.04□□□□□ -1.6
RAT1YOR048C TIM23P32897 222 aa5.04□□□□□ -1.6
RAT1YOR048C PMT1P33775 817 aa5.04□□□□□ -1.6
RAT1YOR048C TSA1P34760 196 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C ZTA1P38230 334 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C MET30P39014 640 aa5.04□□□□□ -1.6
RAT1YOR048C YIL165CP40446 119 aa5.04□□□□□ -1.6
RAT1YOR048C YIL161WP40449 235 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C PFA3P42836 336 aa5.04□□□□□ -1.6
RAT1YOR048C LSG1P53145 640 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C YGR015CP53208 328 aa5.04□□□□□ -1.6
RAT1YOR048C FMP48P53233 369 aa5.04□□□□□ -1.6
RAT1YOR048C CWC25P53854 179 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C CTL1Q03220 320 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C HEH2Q03281 663 aa5.04□□□□□ -1.6
RAT1YOR048C EMI2Q04409 500 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C CST9Q06032 482 aa5.04□□□□□ -1.6
RAT1YOR048C YLR257WQ06146 321 aaKnown RBP5.04□□□□□ -1.6
RAT1YOR048C YNG1Q08465 219 aa5.04□□□□□ -1.6
RAT1YOR048C YPL199CQ08954 240 aa5.04□□□□□ -1.6
RAT1YOR048C TRM8Q12009 286 aa5.04□□□□□ -1.6
RAT1YOR048C YPR064WQ12492 139 aa5.04□□□□□ -1.6
RAT1YOR048C DIT1P21623 536 aa5.03□□□□□ -1.6
RAT1YOR048C MNN5P46982 586 aa5.03□□□□□ -1.6
RAT1YOR048C GLG2P47011 380 aa5.03□□□□□ -1.6
RAT1YOR048C COG7P53195 279 aa5.03□□□□□ -1.6
RAT1YOR048C GIP3Q03016 1276 aa5.03□□□□□ -1.6
RAT1YOR048C YMR087WQ04299 284 aa5.03□□□□□ -1.6
RAT1YOR048C YLR173WQ06247 608 aa5.03□□□□□ -1.6
RAT1YOR048C YDL176WQ12027 708 aa5.03□□□□□ -1.6
RAT1YOR048C YLR099W-AQ3E798 87 aa5.03□□□□□ -1.6
RAT1YOR048C MCM1P11746 286 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms