RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W KAP104P38217 918 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W MSG5P38590 489 aa2.4□□□□□ -2.03
PEP12YOR036W RPH1P39956 796 aa2.4□□□□□ -2.03
PEP12YOR036W SIM1P40472 476 aa2.4□□□□□ -2.03
PEP12YOR036W PMT5P52867 743 aa2.4□□□□□ -2.03
PEP12YOR036W CUE3P53137 624 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W CAF40P53829 373 aa2.4□□□□□ -2.03
PEP12YOR036W AQR1P53943 586 aa2.4□□□□□ -2.03
PEP12YOR036W PRO2P54885 456 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W PIR3Q03180 325 aa2.4□□□□□ -2.03
PEP12YOR036W YMR181CQ03231 154 aa2.4□□□□□ -2.03
PEP12YOR036W RRB1Q04225 511 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W RRP12Q12754 1228 aaKnown RBP2.4□□□□□ -2.03
PEP12YOR036W SAM1P10659 382 aaKnown RBP2.39□□□□□ -2.03
PEP12YOR036W SAM2P19358 384 aaKnown RBP2.39□□□□□ -2.03
PEP12YOR036W PSO2P30620 661 aa2.39□□□□□ -2.03
PEP12YOR036W SKN1P33336 771 aa2.39□□□□□ -2.03
PEP12YOR036W KKQ8P36004 724 aa2.39□□□□□ -2.03
PEP12YOR036W RRF1P38771 230 aa2.39□□□□□ -2.03
PEP12YOR036W YHR177WP38867 453 aa2.39□□□□□ -2.03
PEP12YOR036W PES4P39684 611 aa2.39□□□□□ -2.03
PEP12YOR036W YFR016CP43597 1233 aaKnown RBP2.39□□□□□ -2.03
PEP12YOR036W STE24P47154 453 aa2.39□□□□□ -2.03
PEP12YOR036W YDL186WP48568 277 aa2.39□□□□□ -2.03
PEP12YOR036W PHB2P50085 310 aa2.39□□□□□ -2.03
PEP12YOR036W IBD2P53892 351 aa2.39□□□□□ -2.03
PEP12YOR036W ADA2Q02336 434 aa2.39□□□□□ -2.03
PEP12YOR036W ECM7Q06200 448 aa2.39□□□□□ -2.03
PEP12YOR036W YPR078CQ06813 372 aa2.39□□□□□ -2.03
PEP12YOR036W YPL199CQ08954 240 aa2.39□□□□□ -2.03
PEP12YOR036W TPT1Q12272 230 aaKnown RBP2.39□□□□□ -2.03
PEP12YOR036W CEX1Q12453 761 aa2.39□□□□□ -2.03
PEP12YOR036W SET6Q12529 373 aa2.39□□□□□ -2.03
PEP12YOR036W STF1P01098 86 aa2.38□□□□□ -2.03
PEP12YOR036W SPS22P25380 463 aa2.38□□□□□ -2.03
PEP12YOR036W PRO3P32263 286 aaKnown RBP2.38□□□□□ -2.03
PEP12YOR036W TOA2P32774 122 aa2.38□□□□□ -2.03
PEP12YOR036W SRB2P34162 210 aa2.38□□□□□ -2.03
PEP12YOR036W SPT10P35208 640 aa2.38□□□□□ -2.03
PEP12YOR036W YBR056WP38081 501 aa2.38□□□□□ -2.03
PEP12YOR036W YBL028CP38202 106 aa2.38□□□□□ -2.03
PEP12YOR036W YBR137WP38276 179 aa2.38□□□□□ -2.03
PEP12YOR036W SPP381P38282 291 aaPredicted RBP2.38□□□□□ -2.03
PEP12YOR036W YBP1P38315 674 aa2.38□□□□□ -2.03
PEP12YOR036W MDM31P38880 579 aa2.38□□□□□ -2.03
PEP12YOR036W MMF1P40185 145 aaKnown RBP2.38□□□□□ -2.03
PEP12YOR036W YIL089WP40500 205 aa2.38□□□□□ -2.03
PEP12YOR036W YJL213WP40896 331 aa2.38□□□□□ -2.03
PEP12YOR036W SFH5P47008 294 aa2.38□□□□□ -2.03
PEP12YOR036W TOS2P50078 622 aa2.38□□□□□ -2.03
PEP12YOR036W AZR1P50080 613 aa2.38□□□□□ -2.03
PEP12YOR036W MSO1P53604 210 aaKnown RBP2.38□□□□□ -2.03
PEP12YOR036W PAB1P04147 577 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PEP12YOR036W OPI3P05375 206 aa2.37□□□□□ -2.03
PEP12YOR036W STE3P06783 470 aa2.37□□□□□ -2.03
PEP12YOR036W ARF1P11076 181 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W RNA1P11745 407 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W THR4P16120 514 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W SAG1P20840 650 aa2.37□□□□□ -2.03
PEP12YOR036W MCK1P21965 375 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W SLM5P25345 492 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W SUR1P33300 382 aa2.37□□□□□ -2.03
PEP12YOR036W YKL097CP34245 136 aa2.37□□□□□ -2.03
PEP12YOR036W NAT2P37293 288 aa2.37□□□□□ -2.03
PEP12YOR036W ATP3P38077 311 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W RIB5P38145 238 aa2.37□□□□□ -2.03
PEP12YOR036W LCP5P40079 357 aaPredicted RBP2.37□□□□□ -2.03
PEP12YOR036W MKT1P40850 830 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W TOS3P43637 560 aa2.37□□□□□ -2.03
PEP12YOR036W MPS2P53159 387 aa2.37□□□□□ -2.03
PEP12YOR036W PRM1P53835 661 aa2.37□□□□□ -2.03
PEP12YOR036W BCH1Q05029 724 aa2.37□□□□□ -2.03
PEP12YOR036W SPH1Q06160 661 aa2.37□□□□□ -2.03
PEP12YOR036W PEX27Q08580 376 aa2.37□□□□□ -2.03
PEP12YOR036W RAX1Q08760 435 aa2.37□□□□□ -2.03
PEP12YOR036W THP3Q12049 470 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W RTC5Q12108 567 aaKnown RBP2.37□□□□□ -2.03
PEP12YOR036W ATP1P07251 545 aaKnown RBP2.36□□□□□ -2.03
PEP12YOR036W CBS2P14905 389 aa2.36□□□□□ -2.03
PEP12YOR036W SLY1P22213 666 aa2.36□□□□□ -2.03
PEP12YOR036W COX13P32799 129 aa2.36□□□□□ -2.03
PEP12YOR036W MRP4P32902 394 aa2.36□□□□□ -2.03
PEP12YOR036W SKT5P34226 696 aa2.36□□□□□ -2.03
PEP12YOR036W DOA1P36037 715 aa2.36□□□□□ -2.03
PEP12YOR036W PCH2P38126 564 aa2.36□□□□□ -2.03
PEP12YOR036W YHR122WP38829 231 aa2.36□□□□□ -2.03
PEP12YOR036W LIN1P38852 340 aaPredicted RBP2.36□□□□□ -2.03
PEP12YOR036W YDR089WP38966 869 aa2.36□□□□□ -2.03
PEP12YOR036W JLP2P40206 208 aa2.36□□□□□ -2.03
PEP12YOR036W ATM1P40416 690 aa2.36□□□□□ -2.03
PEP12YOR036W OST1P41543 476 aaKnown RBP2.36□□□□□ -2.03
PEP12YOR036W IDP2P41939 412 aa2.36□□□□□ -2.03
PEP12YOR036W SPG5P42933 373 aa2.36□□□□□ -2.03
PEP12YOR036W YGR117CP53270 476 aa2.36□□□□□ -2.03
PEP12YOR036W RRN9P53437 365 aa2.36□□□□□ -2.03
PEP12YOR036W RET3P53600 189 aa2.36□□□□□ -2.03
PEP12YOR036W HXT11P54862 567 aa2.36□□□□□ -2.03
PEP12YOR036W ASA1Q06822 443 aa2.36□□□□□ -2.03
PEP12YOR036W LDS2Q08218 356 aa2.36□□□□□ -2.03
PEP12YOR036W SNX3Q08826 162 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms